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1
Arginine Side-Chain Hydrogen Exchange: Quantifying Arginine Side-Chain Interactions in Solution.精氨酸侧链氢交换:定量溶液中精氨酸侧链相互作用
Chemphyschem. 2019 Jan 21;20(2):252-259. doi: 10.1002/cphc.201800598. Epub 2018 Sep 24.
2
General Expressions for Carr-Purcell-Meiboom-Gill Relaxation Dispersion for N-Site Chemical Exchange.N 位点化学交换的 Carr-Purcell-Meiboom-Gill 弛豫色散的通用表达式。
Biochemistry. 2018 Aug 7;57(31):4753-4763. doi: 10.1021/acs.biochem.8b00370. Epub 2018 Jul 30.
3
Overview of Relaxation Dispersion NMR Spectroscopy to Study Protein Dynamics and Protein-Ligand Interactions.用于研究蛋白质动力学和蛋白质-配体相互作用的弛豫色散核磁共振光谱概述。
Curr Protoc Protein Sci. 2018 Apr;92(1):e57. doi: 10.1002/cpps.57.
4
Dynamic Allostery in PLCγ1 and Its Modulation by a Cancer Mutation Revealed by MD Simulation and NMR.通过 MD 模拟和 NMR 揭示 PLCγ1 的动态变构及其癌症突变的调节
Biophys J. 2018 Jul 3;115(1):31-45. doi: 10.1016/j.bpj.2018.05.031.
5
Monitoring N Chemical Shifts During Protein Folding by Pressure-Jump NMR.通过压力跳跃 NMR 监测蛋白质折叠过程中的 N 化学位移。
J Am Chem Soc. 2018 Jul 5;140(26):8096-8099. doi: 10.1021/jacs.8b04833. Epub 2018 Jun 25.
6
Multiple frequency saturation pulses reduce CEST acquisition time for quantifying conformational exchange in biomolecules.多频率饱和脉冲可减少用于量化生物分子构象交换的CEST采集时间。
J Biomol NMR. 2018 May;71(1):19-30. doi: 10.1007/s10858-018-0186-1. Epub 2018 May 23.
7
Resolving biomolecular motion and interactions by R and R relaxation dispersion NMR.通过 R 和 R 弛豫分散 NMR 解析生物分子的运动和相互作用。
Methods. 2018 Sep 15;148:28-38. doi: 10.1016/j.ymeth.2018.04.026. Epub 2018 Apr 26.
8
Dramatic Decrease in CEST Measurement Times Using Multi-Site Excitation.使用多部位激发显著减少CEST测量时间
Chemphyschem. 2018 Jul 17;19(14):1707-1710. doi: 10.1002/cphc.201800249. Epub 2018 May 24.
9
Dynamic basis for dG•dT misincorporation via tautomerization and ionization.通过互变异构和离子化作用产生 dG•dT 错配的动态基础。
Nature. 2018 Feb 8;554(7691):195-201. doi: 10.1038/nature25487. Epub 2018 Jan 31.
10
Targeting a Dark Excited State of HIV-1 Nucleocapsid by Antiretroviral Thioesters Revealed by NMR Spectroscopy.通过 NMR 光谱学揭示抗逆转录病毒硫代酯靶向 HIV-1 衣壳的暗激发态。
Angew Chem Int Ed Engl. 2018 Mar 1;57(10):2687-2691. doi: 10.1002/anie.201713172. Epub 2018 Feb 2.

化学交换

Chemical Exchange.

作者信息

Palmer Arthur G, Koss Hans

机构信息

Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY, United States.

Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY, United States.

出版信息

Methods Enzymol. 2019;615:177-236. doi: 10.1016/bs.mie.2018.09.028. Epub 2018 Dec 4.

DOI:10.1016/bs.mie.2018.09.028
PMID:30638530
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7493007/
Abstract

The phenomenon of chemical or conformational exchange in NMR spectroscopy has enabled detailed characterization of time-dependent aspects of biomolecular function, including folding, molecular recognition, allostery, and catalysis, on timescales from microsecond to second. Importantly, NMR methods based on a variety of spin relaxation parameters have been developed that provide quantitative information on interconversion kinetics, thermodynamic properties, and structural features of molecular states populated to a fraction of a percent at equilibrium and otherwise unobservable by other NMR approaches. The ongoing development of more sophisticated experimental techniques and the necessity to apply these methods to larger and more complex molecular systems engenders a corresponding need for theoretical advances describing such techniques and facilitating data analysis in applications. This review surveys current aspects of the theory of chemical exchange, as utilized in ZZ-exchange; Hahn and Carr-Purcell-Meiboom-Gill (CPMG) spin-echo; and R, chemical exchange saturation transfer (CEST), and dark state saturation transfer (DEST) spin-locking experiments. The review emphasizes theoretical results for kinetic topologies with more than two interconverting states, both to obtain compact analytical forms suitable for data analysis and to establish conditions for distinguishability between alternative kinetic schemes.

摘要

核磁共振波谱中的化学或构象交换现象,已能够在微秒到秒的时间尺度上,对生物分子功能的时间依赖性方面进行详细表征,包括折叠、分子识别、别构作用和催化作用。重要的是,基于各种自旋弛豫参数的核磁共振方法已经得到开发,这些方法能提供关于互变动力学、热力学性质以及平衡时占比仅百分之几且其他核磁共振方法无法观测到的分子态结构特征的定量信息。更复杂实验技术的不断发展以及将这些方法应用于更大、更复杂分子系统的必要性,相应地需要在理论上取得进展,以描述此类技术并促进应用中的数据分析。本综述考察了化学交换理论在ZZ交换、哈恩和 Carr-Purcell-Meiboom-Gill(CPMG)自旋回波以及R、化学交换饱和转移(CEST)和暗态饱和转移(DEST)自旋锁定实验中的当前应用情况。该综述强调了具有两个以上互变状态的动力学拓扑的理论结果,既为了获得适合数据分析的紧凑解析形式,也为了确定区分替代动力学方案的条件。