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用于诊断巴德-比德尔综合征的靶向多基因检测板检测:在BBS1、BBS2、BBS4、BBS7、BBS9、BBS10基因中鉴定出9个新突变。

Targeted multi-gene panel testing for the diagnosis of Bardet Biedl syndrome: Identification of nine novel mutations across BBS1, BBS2, BBS4, BBS7, BBS9, BBS10 genes.

作者信息

Ece Solmaz Asli, Onay Huseyin, Atik Tahir, Aykut Ayca, Cerrah Gunes Meltem, Ozalp Yuregir Ozge, Bas Veysel Nijat, Hazan Filiz, Kirbiyik Ozgur, Ozkinay Ferda

机构信息

Ege University Faculty of Medicine, Medical Genetics, Izmir, Turkey.

Ege University Faculty of Medicine, Medical Genetics, Izmir, Turkey.

出版信息

Eur J Med Genet. 2015 Dec;58(12):689-94. doi: 10.1016/j.ejmg.2015.10.011. Epub 2015 Oct 27.

DOI:10.1016/j.ejmg.2015.10.011
PMID:26518167
Abstract

Bardet-Biedl Syndrome (BBS) is a rare, autosomal-recessive ciliopathy characterized by obesity, rod-cone dystrophy, postaxial polydactyly, renal abnormalities, genital abnormalities and learning difficulties. To date, mutations in 21 different genes have been described as being responsible for BBS. Recently sequential gene sequencing has been replaced by next generation sequencing (NGS) applications. In this study, 15 patients with clinically diagnosed BBS were investigated using a next generation sequencing panel which included 17 known BBS causing genes (BBS1, BBS2, ARL6, BBS4, BBS5, MKKS, BBS7, TTC8, BBS9, BBS10, TRIM32, BBS12, MKS1, NPHP6, WDPCP, SDCCAG8, NPHP1). A genetic diagnosis was achieved in 13 patients (86.6%) and involved 9 novel and 3 previously described pathogenic variants in 6 of 17 BBS causing genes. BBS10 and BBS1 were the most commonly involved genes with frequencies of 31% and 23% respectively. Three of the 13 patients had an affected sibling. All affected siblings were found to be homozygous for the mutation detected in the proband. No evidence of triallelic inheritance was detected. Although limited association between certain genes and phenotypic features has been observed in this study, it is considered that additional studies are needed to better characterize the genotype-phenotype correlation of BBS. Our results demonstrate that NGS panels are feasible and effective method for providing high diagnostic yields in the diseases caused by multiple genes such as BBS.

摘要

巴德-比埃尔综合征(BBS)是一种罕见的常染色体隐性遗传性纤毛病,其特征为肥胖、视锥视杆营养不良、轴后多指畸形、肾脏异常、生殖器异常和学习困难。迄今为止,已发现21种不同基因的突变与BBS有关。最近,新一代测序(NGS)技术已取代了序列基因测序。在本研究中,我们使用包含17个已知的BBS致病基因(BBS1、BBS2、ARL6、BBS4、BBS5、MKKS、BBS7、TTC8、BBS9、BBS10、TRIM32、BBS12、MKS1、NPHP6、WDPCP、SDCCAG8、NPHP1)的新一代测序板对15例临床诊断为BBS的患者进行了研究。13例患者(86.6%)获得了基因诊断,涉及17个BBS致病基因中的6个基因的9个新的和3个先前描述的致病变异。BBS10和BBS1是最常受累的基因,频率分别为31%和23%。13例患者中有3例有患病的兄弟姐妹。所有患病的兄弟姐妹均被发现与先证者检测到的突变纯合。未检测到三等位基因遗传的证据。尽管本研究中观察到某些基因与表型特征之间存在有限的关联,但仍认为需要进一步研究以更好地描述BBS的基因型-表型相关性。我们的结果表明,NGS板是在BBS等多基因疾病中提供高诊断率的可行且有效的方法。

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