Chen Yimin, Qiu Wu, Kishimoto Jessica, Gao Yuan, Chan Rosa H M, de Ribaupierre Sandrine, Fenster Aaron, Chiu Bernard
Department of Electronic Engineering, City University of Hong Kong, Kowloon, Hong Kong.
Imaging Research Laboratories, Robarts Research Institute, The University of Western Ontario, London, Ontario N6A 5K8, Canada.
Med Phys. 2015 Nov;42(11):6387-405. doi: 10.1118/1.4932366.
Intraventricular hemorrhage (IVH) is a major cause of brain injury in preterm neonates. Three dimensional ultrasound (US) imaging systems have been developed to visualize 3D anatomical structure of preterm neonatal intracranial ventricular system with IVH and ventricular dilation. To allow quantitative analysis, the ventricle system is required to be segmented accurately and efficiently from 3D US images. Although semiautomatic segmentation algorithms have been developed, local segmentation accuracy and variability associated with these algorithms should be evaluated statistically before they can be applied in clinical settings. This work proposes a statistical framework to quantify the local accuracy and variability and performs statistical tests to identify locations where the semiautomatically segmented surfaces are significantly different from manually segmented surfaces.
Three dimensional lateral ventricle US images of preterm neonates were each segmented six times manually and using a semiautomated segmentation algorithm. The local difference between manually and algorithmically segmented surfaces as well as the segmentation variability for each method was computed and superimposed on the ventricular surface of each subject. To summarize the segmentation performance for a whole group of subjects, the subject-specific local difference and standard deviation maps were registered onto a 3D template ventricular surface using a nonrigid registration algorithm. Pointwise, intersubject average accuracy and pooled variability for the whole group of subjects can be computed and visualized on the template surface, providing a summary of performance of the segmentation algorithm for the whole group of ventricles with highly variable geometry. In addition to pointwise statistical analysis performed on the template surface, statistical conclusion regarding the accuracy of the segmentation algorithm was made for subregions and the whole ventricle with the spatial correlation of pointwise accuracy taken into account.
Ten 3D US images were involved in this study. Pointwise local difference, ΔS, its absolute value |ΔS| as well as the standard deviations of the manual and algorithm segmentations were computed and superimposed on the each ventricle surface. Regions with lower segmentation accuracy and higher segmentation variability can be identified from these maps, and the localized information was applied to improve the accuracy of the algorithm. Intersubject average ΔS and |ΔS| as well as pooled standard deviations was computed on the template surface. Intersubject average ΔS and |ΔS| indicated that the algorithm underestimated regions in the neighborhood of the tips of anterior, inferior, and posterior horns. Intersubject pooled standard deviations indicated that manual segmentation had a higher segmentation variability than algorithm segmentation over the whole ventricle. Statistical analysis on the template surface showed that there was significant difference between algorithm and manual methods for segmenting the right lateral ventricle but not for the left lateral ventricle.
A framework was proposed for evaluating, visualizing, and summarizing the local accuracy and variability of a segmentation algorithm. This framework can be used for improving the accuracy of segmentation algorithms, as well as providing useful feedback to improve the manual segmentation performance. More importantly, this framework can be applied for longitudinal monitoring of local ventricular changes of neonates with IVH.
脑室内出血(IVH)是早产新生儿脑损伤的主要原因。已经开发出三维超声(US)成像系统,以可视化患有IVH和脑室扩张的早产新生儿颅内脑室系统的三维解剖结构。为了进行定量分析,需要从三维超声图像中准确且高效地分割脑室系统。尽管已经开发出半自动分割算法,但在将这些算法应用于临床之前,应进行统计学评估其局部分割准确性和变异性。这项工作提出了一个统计框架来量化局部准确性和变异性,并进行统计测试以识别半自动分割表面与手动分割表面有显著差异的位置。
对早产新生儿的三维侧脑室超声图像分别进行六次手动分割和使用半自动分割算法进行分割。计算手动分割表面和算法分割表面之间的局部差异以及每种方法的分割变异性,并叠加在每个受试者的脑室表面上。为了总结整个受试者组的分割性能,使用非刚性配准算法将受试者特定的局部差异和标准差图配准到三维模板脑室表面上。可以计算并在模板表面上可视化整个受试者组的逐点、受试者间平均准确性和合并变异性,从而提供具有高度可变几何形状的整个脑室组分割算法性能的总结。除了在模板表面上进行逐点统计分析外,还考虑了逐点准确性的空间相关性,对分割算法在子区域和整个脑室的准确性得出统计结论。
本研究涉及十张三维超声图像。计算逐点局部差异ΔS、其绝对值|ΔS|以及手动分割和算法分割的标准差,并叠加在每个脑室表面上。从这些图中可以识别出分割准确性较低和分割变异性较高的区域,并将局部信息用于提高算法的准确性。在模板表面上计算受试者间平均ΔS和|ΔS|以及合并标准差。受试者间平均ΔS和|ΔS|表明该算法低估了前角、下角和后角尖端附近的区域。受试者间合并标准差表明,在整个脑室中,手动分割的分割变异性高于算法分割。在模板表面上的统计分析表明,在分割右侧脑室时,算法和手动方法之间存在显著差异,而在分割左侧脑室时则没有。
提出了一个用于评估、可视化和总结分割算法局部准确性和变异性的框架。该框架可用于提高分割算法的准确性,并提供有用的反馈以改善手动分割性能。更重要的是,该框架可用于对患有IVH的新生儿的局部脑室变化进行纵向监测。