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嗜鱼杆菌属新属,新种,一种拟杆菌门成员,从受细菌性溶血性黄疸影响的黄尾鱼(五条鰤)中分离得到,并提议建立一个新科,嗜鱼杆菌科新科。

Ichthyobacterium seriolicida gen. nov., sp. nov., a member of the phylum 'Bacteroidetes', isolated from yellowtail fish (Seriola quinqueradiata) affected by bacterial haemolytic jaundice, and proposal of a new family, Ichthyobacteriaceae fam. nov.

作者信息

Takano Tomokazu, Matsuyama Tomomasa, Sakai Takamitsu, Nakamura Yoji, Kamaishi Takashi, Nakayasu Chihaya, Kondo Hidehiro, Hirono Ikuo, Fukuda Yutaka, Sorimachi Minoru, Iida Takaji

机构信息

National Research Institute of Aquaculture,Fisheries Research Agency, 422-1 Nakatsuhamaura, Minami-ise, Mie 516-0193,Japan.

National Research Institute of Fisheries Science,Fisheries Research Agency, 2-12-4 Fukuura, Kanazawa, Yokohama, Kanagawa, 236-8648,Japan.

出版信息

Int J Syst Evol Microbiol. 2016 Feb;66(2):580-586. doi: 10.1099/ijsem.0.000757. Epub 2015 Nov 9.

Abstract

A novel Gram-stain-negative, rod-shaped (0.3 × 4-6 μm), non-flagellated, aerobic strain with gliding motility, designated JBKA-6T, was isolated in 1991 from a yellowtail fish, Seriola quinqueradiata, showing symptoms of bacterial haemolytic jaundice. 16S rRNA gene sequence analysis showed that strain JBKA-6T was related most closely to members of the family Flavobacteriaceae in the phylum 'Bacteroidetes'. Furthermore, based on gyrB gene sequence analysis, JBKA-6T was classified into a single clade within the order Flavobacteriales, which was distinct from the known clades of the families Flavobacteriaceae, Blattabacteriaceae and Cryomorphaceae. The predominant isoprenoid quinone was identified as MK-6 (97.9 %), and the major cellular fatty acids (>10 %) were C14 : 0 and iso-C15 : 0. The main polar lipids were phosphatidylethanolamine, three unidentified phospholipids, two unidentified aminophospholipids and two unidentified polar lipids. The DNA G+C content of JBKA-6T, as derived from its whole genome, was 33.4 mol%. The distinct phylogenetic position and phenotypic traits of strain JBKA-6T distinguish it from all other described species of the phylum 'Bacteroidetes', and therefore it was concluded that strain JBKA-6T represents a new member of the phylum 'Bacteroidetes', and the name Ichthyobacterium seriolicida gen. nov., sp. nov. is proposed. The type strain of Ichthyobacterium seriolicida is JBKA-6T ( = ATCC BAA-2465T = JCM 18228T). We also propose that Icthyobacterium gen. nov. is the type genus of a novel family, Ichthyobacteriaceae fam. nov.

摘要

1991年,从出现细菌性溶血性黄疸症状的五条鰤鱼(Seriola quinqueradiata)中分离出一株新型革兰氏阴性、杆状(0.3×4-6μm)、无鞭毛、具有滑行运动能力的需氧菌株,命名为JBKA-6T。16S rRNA基因序列分析表明,菌株JBKA-6T与“拟杆菌门”中黄杆菌科的成员关系最为密切。此外,基于gyrB基因序列分析,JBKA-6T被归类到黄杆菌目内的一个单独分支中,该分支与黄杆菌科、扁虱杆菌科和嗜冷杆菌科的已知分支不同。主要的类异戊二烯醌被鉴定为MK-6(97.9%),主要的细胞脂肪酸(>10%)为C14∶0和异-C15∶0。主要的极性脂为磷脂酰乙醇胺、三种未鉴定的磷脂、两种未鉴定的氨基磷脂和两种未鉴定的极性脂。根据全基因组推导,JBKA-6T的DNA G+C含量为33.4mol%。菌株JBKA-6T独特的系统发育位置和表型特征使其与“拟杆菌门”中所有其他已描述的物种区分开来,因此得出结论,菌株JBKA-6T代表“拟杆菌门”的一个新成员,并提出新属名鱼杆菌属(Ichthyobacterium)、新种名杀鰤鱼杆菌(Ichthyobacterium seriolicida)。杀鰤鱼杆菌的模式菌株为JBKA-6T(=ATCC BAA-2465T =JCM 18228T)。我们还提议鱼杆菌属(Icthyobacterium)为新科鱼杆菌科(Ichthyobacteriaceae)的模式属。

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