Takano Tomokazu, Matsuyama Tomomasa, Sakai Takamitsu, Nakamura Yoji, Kamaishi Takashi, Nakayasu Chihaya, Kondo Hidehiro, Hirono Ikuo, Fukuda Yutaka, Sorimachi Minoru, Iida Takaji
National Research Institute of Aquaculture,Fisheries Research Agency, 422-1 Nakatsuhamaura, Minami-ise, Mie 516-0193,Japan.
National Research Institute of Fisheries Science,Fisheries Research Agency, 2-12-4 Fukuura, Kanazawa, Yokohama, Kanagawa, 236-8648,Japan.
Int J Syst Evol Microbiol. 2016 Feb;66(2):580-586. doi: 10.1099/ijsem.0.000757. Epub 2015 Nov 9.
A novel Gram-stain-negative, rod-shaped (0.3 × 4-6 μm), non-flagellated, aerobic strain with gliding motility, designated JBKA-6T, was isolated in 1991 from a yellowtail fish, Seriola quinqueradiata, showing symptoms of bacterial haemolytic jaundice. 16S rRNA gene sequence analysis showed that strain JBKA-6T was related most closely to members of the family Flavobacteriaceae in the phylum 'Bacteroidetes'. Furthermore, based on gyrB gene sequence analysis, JBKA-6T was classified into a single clade within the order Flavobacteriales, which was distinct from the known clades of the families Flavobacteriaceae, Blattabacteriaceae and Cryomorphaceae. The predominant isoprenoid quinone was identified as MK-6 (97.9 %), and the major cellular fatty acids (>10 %) were C14 : 0 and iso-C15 : 0. The main polar lipids were phosphatidylethanolamine, three unidentified phospholipids, two unidentified aminophospholipids and two unidentified polar lipids. The DNA G+C content of JBKA-6T, as derived from its whole genome, was 33.4 mol%. The distinct phylogenetic position and phenotypic traits of strain JBKA-6T distinguish it from all other described species of the phylum 'Bacteroidetes', and therefore it was concluded that strain JBKA-6T represents a new member of the phylum 'Bacteroidetes', and the name Ichthyobacterium seriolicida gen. nov., sp. nov. is proposed. The type strain of Ichthyobacterium seriolicida is JBKA-6T ( = ATCC BAA-2465T = JCM 18228T). We also propose that Icthyobacterium gen. nov. is the type genus of a novel family, Ichthyobacteriaceae fam. nov.
1991年,从出现细菌性溶血性黄疸症状的五条鰤鱼(Seriola quinqueradiata)中分离出一株新型革兰氏阴性、杆状(0.3×4-6μm)、无鞭毛、具有滑行运动能力的需氧菌株,命名为JBKA-6T。16S rRNA基因序列分析表明,菌株JBKA-6T与“拟杆菌门”中黄杆菌科的成员关系最为密切。此外,基于gyrB基因序列分析,JBKA-6T被归类到黄杆菌目内的一个单独分支中,该分支与黄杆菌科、扁虱杆菌科和嗜冷杆菌科的已知分支不同。主要的类异戊二烯醌被鉴定为MK-6(97.9%),主要的细胞脂肪酸(>10%)为C14∶0和异-C15∶0。主要的极性脂为磷脂酰乙醇胺、三种未鉴定的磷脂、两种未鉴定的氨基磷脂和两种未鉴定的极性脂。根据全基因组推导,JBKA-6T的DNA G+C含量为33.4mol%。菌株JBKA-6T独特的系统发育位置和表型特征使其与“拟杆菌门”中所有其他已描述的物种区分开来,因此得出结论,菌株JBKA-6T代表“拟杆菌门”的一个新成员,并提出新属名鱼杆菌属(Ichthyobacterium)、新种名杀鰤鱼杆菌(Ichthyobacterium seriolicida)。杀鰤鱼杆菌的模式菌株为JBKA-6T(=ATCC BAA-2465T =JCM 18228T)。我们还提议鱼杆菌属(Icthyobacterium)为新科鱼杆菌科(Ichthyobacteriaceae)的模式属。