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嗜盐阿里福迪尼菌新种,阿里福迪尼菌属的中度嗜盐成员,以及新科——温泉杆菌科的提议

Aliifodinibius halophilus sp. nov., a moderately halophilic member of the genus Aliifodinibius, and proposal of Balneolaceae fam. nov.

作者信息

Xia Jun, Ling Si-Kai, Wang Xiao-Qun, Chen Guan-Jun, Du Zong-Jun

机构信息

College of Marine Science, Shandong University at Weihai, Weihai 264209, PR China.

State Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, PR China.

出版信息

Int J Syst Evol Microbiol. 2016 Jun;66(6):2225-2233. doi: 10.1099/ijsem.0.001012. Epub 2016 Mar 9.

Abstract

A novel Gram-stain-negative, rod-shaped, facultatively anaerobic, oxidase-negative and catalase-positive bacterium, designated 2W32T, was isolated from a marine solar saltern on the coast of Weihai, Shandong Province, China. Strain 2W32T was tolerant to moderate salt conditions. Optimal growth occurred at 33-37 °C (range 20-45 °C) and pH 7.5-8.0 (range pH 7.0-8.5) with 6-10 % (w/v) NaCl (range 2-18 %). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain 2W32T shared highest similarity with Aliifodinibius sediminis YIM J21T (94.6 %), Aliifodinibius roseus YIM D15T (94.4 %), Fodinibius salinus YIM C003T (93.6 %), Gracilimonas tropica CL-CB462T (88.6 %) and Balneola vulgaris 13IX/A01/164T (86.4 %) and less than 83.0 % similarity with other species of the phylum Bacteroidetes. The isolate and closely related species formed a novel family-level clade in the phylum Bacteroidetes. The polar lipid profile of the novel isolate consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, an unidentified aminolipid, an unidentified glycolipid and an unidentified lipid. The dominant cellular fatty acids (>10 %) were iso-C15 : 0, iso-C17 : 1ω9c and summed feature 3 (C16:1ω7c and/or iso-C15 : 0 2-OH) and the sole respiratory quinone was menaquinone 7 (MK-7). The DNA G+C content of strain 2W32T was 47.5 mol %. Comparative analysis of 16S rRNA gene sequences and characterization indicated that strain 2W32T represents a novel species within the genus Aliifodinibius, for which the name Aliifodinibius halophilus sp. nov. is proposed. The type strain is 2W32T (=KCTC 42497T=CICC 23869T). In addition, a novel family, Balneolaceae fam. nov., is proposed to accommodate the genera Fodinibius, Aliifodinibius, Gracilimonas and Balneola.

摘要

从中国山东省威海市海岸的一个海洋太阳盐场分离出一株革兰氏染色阴性、杆状、兼性厌氧、氧化酶阴性且过氧化氢酶阳性的新型细菌,命名为2W32T。菌株2W32T耐受中等盐度条件。在33 - 37 °C(范围20 - 45 °C)和pH 7.5 - 8.0(范围pH 7.0 - 8.5)以及6 - 10 %(w/v)NaCl(范围2 - 18 %)的条件下生长最佳。基于16S rRNA基因序列的系统发育分析表明,菌株2W32T与沉积物阿利福特菌YIM J21T(94.6 %)、玫瑰阿利福特菌YIM D15T(�4.4 %)、盐沼福迪尼菌YIM C003T(93.6 %)、热带纤细单胞菌CL - CB462T(88.6 %)和普通盐沼菌13IX/A01/‌164T(86.4 %)的相似性最高,与拟杆菌门的其他物种相似性低于83.0 %。该分离株及其近缘物种在拟杆菌门中形成了一个新的科级分支。该新型分离株的极性脂质谱由双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰胆碱、一种未鉴定的氨基脂质、一种未鉴定的糖脂和一种未鉴定的脂质组成。主要的细胞脂肪酸(>10 %)为异C15 : 0、异C17 : 1ω9c和总和特征3(C16:1ω7c和/或异C15 : 0 2 - OH),唯一的呼吸醌为甲基萘醌7(MK - 7)。菌株2W32T的DNA G + C含量为47.5 mol %。16S rRNA基因序列的比较分析和特征表明,菌株2W32T代表阿利福特菌属内的一个新物种,为此提出新名称嗜盐阿利福特菌(Aliifodinibius halophilus sp. nov.)。模式菌株为2W32T(=KCTC 42497T=CICC 23869T)。此外,还提出了一个新科——盐沼菌科(Balneolaceae fam. nov.),以包含福迪尼菌属、阿利福特菌属、纤细单胞菌属和盐沼菌属。

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