Baiardi Alberto, Bloino Julien, Barone Vincenzo
Scuola Normale Superiore , Piazza dei Cavalieri 7, I-56126 Pisa, Italy.
Consiglio Nazionale delle Ricerche, Istituto di Chimica dei Composti OrganoMetallici (ICCOM-CNR), UOS di Pisa, Area della Ricerca CNR , Via G. Moruzzi 1, I-56124 Pisa, Italy.
J Chem Theory Comput. 2015 Jul 14;11(7):3267-80. doi: 10.1021/acs.jctc.5b00241. Epub 2015 Jun 1.
The interpretation and analysis of experimental resonance-Raman (RR) spectra can be significantly facilitated by vibronic computations based on reliable quantum-mechanical (QM) methods. With the aim of improving the description of large and flexible molecules, our recent time-dependent formulation to compute vibrationally resolved electronic spectra, based on Cartesian coordinates, has been extended to support internal coordinates. A set of nonredundant delocalized coordinates is automatically generated from the molecular connectivity thanks to a new general and robust procedure. In order to validate our implementation, a series of molecules has been used as test cases. Among them, rigid systems show that normal modes based on Cartesian and delocalized internal coordinates provide equivalent results, but the latter set is much more convenient and reliable for systems characterized by strong geometric deformations associated with the electronic transition. The so-called Z-matrix internal coordinates, which perform well for chain molecules, are also shown to be poorly suited in the presence of cycles or nonstandard structures.
基于可靠量子力学(QM)方法的振动电子计算可显著促进对实验共振拉曼(RR)光谱的解释与分析。为改进对大尺寸且结构灵活分子的描述,我们近期基于笛卡尔坐标计算振动分辨电子光谱的含时公式已扩展至支持内坐标。借助一种全新通用且稳健的程序,可根据分子连接性自动生成一组非冗余离域坐标。为验证我们的实现方法,已将一系列分子用作测试案例。其中,刚性体系表明基于笛卡尔坐标和离域内坐标的简正模式能提供等效结果,但对于具有与电子跃迁相关强烈几何变形特征的体系,后一组坐标更为便捷且可靠。对链状分子表现良好的所谓Z矩阵内坐标,在存在环或非标准结构时也显示出不太适用。