• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于相关单参考方法的表面跳跃动力学:以9H-腺嘌呤为例

Surface Hopping Dynamics with Correlated Single-Reference Methods: 9H-Adenine as a Case Study.

作者信息

Plasser Felix, Crespo-Otero Rachel, Pederzoli Marek, Pittner Jiri, Lischka Hans, Barbatti Mario

机构信息

Interdisciplinary Center for Scientific Computing, Ruprecht-Karls-University , Im Neuenheimer Feld 368, 69120 Heidelberg, Germany.

Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany.

出版信息

J Chem Theory Comput. 2014 Apr 8;10(4):1395-405. doi: 10.1021/ct4011079. Epub 2014 Mar 13.

DOI:10.1021/ct4011079
PMID:26580359
Abstract

Surface hopping dynamics methods using the coupled cluster to approximated second order (CC2), the algebraic diagrammatic construction scheme to second order (ADC(2)), and the time-dependent density functional theory (TDDFT) were developed and implemented into the program system Newton-X. These procedures are especially well-suited to simulate nonadiabatic processes involving various excited states of the same multiplicity and the dynamics in the first excited state toward an energetic minimum or up to the region where a crossing with the ground state is found. 9H-adenine in the gas phase was selected as the test case. The results showed that dynamics with ADC(2) is very stable, whereas CC2 dynamics fails within 100 fs, because of numerical instabilities present in the case of quasi-degenerate excited states. ADC(2) dynamics correctly predicts the ultrafast character of the deactivation process. It predicts that C2-puckered conical intersections should be the preferential pathway for internal conversion for low-energy excitation. C6-puckered conical intersection also contributes appreciably to internal conversion, becoming as important as C2-puckered for high-energy excitations. In any case, H-elimination plays only a minor role. TDDFT based on a long-range corrected functional fails to predict the ultrafast deactivation. In the comparison with several other methods previously used for dynamics simulations of adenine, ADC(2) has the best performance, providing the most consistent results so far.

摘要

利用耦合簇近似二阶方法(CC2)、二阶代数图示构建方案(ADC(2))和含时密度泛函理论(TDDFT)的表面跳跃动力学方法已被开发并应用于程序系统Newton-X中。这些程序特别适合模拟涉及相同多重性的各种激发态的非绝热过程,以及第一激发态向能量最小值或直至发现与基态交叉区域的动力学过程。选择气相中的9H-腺嘌呤作为测试案例。结果表明,ADC(2)动力学非常稳定,而CC2动力学在100飞秒内失败,这是由于准简并激发态情况下存在数值不稳定性。ADC(2)动力学正确地预测了失活过程的超快特性。它预测C2-褶皱锥形交叉点应该是低能激发下内转换的优先途径。C6-褶皱锥形交叉点对内转换也有显著贡献,对于高能激发来说,其重要性与C2-褶皱相当。在任何情况下,氢消除仅起次要作用。基于长程校正泛函的TDDFT无法预测超快失活。与先前用于腺嘌呤动力学模拟的其他几种方法相比,ADC(2)具有最佳性能,提供了迄今为止最一致的结果。

相似文献

1
Surface Hopping Dynamics with Correlated Single-Reference Methods: 9H-Adenine as a Case Study.基于相关单参考方法的表面跳跃动力学:以9H-腺嘌呤为例
J Chem Theory Comput. 2014 Apr 8;10(4):1395-405. doi: 10.1021/ct4011079. Epub 2014 Mar 13.
2
Photochemical deactivation process of HCFC-133a (C2H2F3Cl): a nonadiabatic dynamics study.HCFC - 133a(C2H2F3Cl)的光化学失活过程:一项非绝热动力学研究。
J Phys Chem A. 2014 Dec 26;118(51):12041-9. doi: 10.1021/jp507681g. Epub 2014 Oct 22.
3
Assessment of Approximate Coupled-Cluster and Algebraic-Diagrammatic-Construction Methods for Ground- and Excited-State Reaction Paths and the Conical-Intersection Seam of a Retinal-Chromophore Model.用于视网膜发色团模型的基态和激发态反应路径以及锥形交叉缝的近似耦合簇和代数图示构建方法的评估。
J Chem Theory Comput. 2015 Dec 8;11(12):5758-81. doi: 10.1021/acs.jctc.5b00022. Epub 2015 Nov 13.
4
Critical appraisal of excited state nonadiabatic dynamics simulations of 9H-adenine.9H-腺嘌呤激发态非绝热动力学模拟的批判性评价。
J Chem Phys. 2012 Dec 14;137(22):22A503. doi: 10.1063/1.4731649.
5
QM/MM nonadiabatic decay dynamics of 9H-adenine in aqueous solution.水溶液中 9H-腺嘌呤的 QM/MM 非绝热衰减动力学。
Chemphyschem. 2011 Jul 11;12(10):1989-98. doi: 10.1002/cphc.201001054. Epub 2011 Jun 14.
6
On the description of conical intersections between excited electronic states with LR-TDDFT and ADC(2).基于含时密度泛函理论(LR-TDDFT)和含时耦合簇理论(ADC(2))对激发电子态间锥形交叉的描述
J Chem Phys. 2023 Dec 7;159(21). doi: 10.1063/5.0176140.
7
Ab initio excited state properties and dynamics of a prototype sigma-bridged-donor-acceptor molecule.σ桥连供体-受体原型分子的从头算激发态性质及动力学
J Phys Chem A. 2009 Sep 3;113(35):9595-602. doi: 10.1021/jp901356k.
8
Ultrafast radiationless transition pathways through conical intersections in photo-excited 9H-adenine.光激发 9H-腺嘌呤中通过锥形交叉的超快无辐射跃迁途径。
Phys Chem Chem Phys. 2010;12(20):5317-28. doi: 10.1039/b926102h.
9
Ab initio studies on the radiationless decay mechanisms of the lowest excited singlet states of 9H-adenine.关于9H-腺嘌呤最低激发单重态无辐射衰变机制的从头算研究。
J Am Chem Soc. 2005 May 4;127(17):6257-65. doi: 10.1021/ja044321c.
10
Timescales of N-H bond dissociation in pyrrole: a nonadiabatic dynamics study.吡咯中N-H键解离的时间尺度:一项非绝热动力学研究。
Phys Chem Chem Phys. 2015 Jul 15;17(29):19012-20. doi: 10.1039/c5cp02100f.

引用本文的文献

1
Photorelaxation via Water-Mediated Electron Transfer in Fully Solvated Heptazine.在完全溶剂化的七嗪中通过水介导的电子转移实现光弛豫。
J Phys Chem Lett. 2025 Aug 14;16(32):8075-8083. doi: 10.1021/acs.jpclett.5c01896. Epub 2025 Jul 31.
2
Roadmap for Molecular Benchmarks in Nonadiabatic Dynamics.非绝热动力学中分子基准的路线图
J Phys Chem A. 2025 Aug 7;129(31):7023-7050. doi: 10.1021/acs.jpca.5c02171. Epub 2025 Jul 15.
3
Excited-state nonadiabatic dynamics in explicit solvent using machine learned interatomic potentials.
利用机器学习原子间势研究显式溶剂中的激发态非绝热动力学。
Digit Discov. 2025 Apr 24. doi: 10.1039/d5dd00044k.
4
Simulating the Energy Capture Process in Push-Pull Norbornadiene-Quadricyclane Photoswitches.模拟推拉式降冰片二烯-四环烷光开关中的能量捕获过程。
J Phys Chem Lett. 2025 May 1;16(17):4315-4325. doi: 10.1021/acs.jpclett.5c00634. Epub 2025 Apr 23.
5
Complementing Adiabatic and Nonadiabatic Methods To Understand Internal Conversion Dynamics in Porphyrin Derivatives.互补的绝热和非绝热方法用于理解卟啉衍生物中的内转换动力学。
J Chem Theory Comput. 2024 Dec 24;20(24):10759-10769. doi: 10.1021/acs.jctc.4c00698. Epub 2024 Dec 11.
6
Base-pairing of uracil and 2,6-diaminopurine: from cocrystals to photoreactivity.尿嘧啶与2,6-二氨基嘌呤的碱基配对:从共晶体到光反应性
iScience. 2024 May 7;27(6):109894. doi: 10.1016/j.isci.2024.109894. eCollection 2024 Jun 21.
7
Quantum Quality with Classical Cost: Nonadiabatic Dynamics Simulations Using the Mapping Approach to Surface Hopping.兼具量子品质与经典成本:采用映射表面跳跃方法的非绝热动力学模拟
J Phys Chem Lett. 2024 Jun 6;15(22):5814-5823. doi: 10.1021/acs.jpclett.4c00535. Epub 2024 May 23.
8
A Theoretical Perspective on the Photochemistry of Boron-Nitrogen Lewis Adducts.硼氮路易斯加合物光化学的理论视角
J Phys Chem A. 2024 Feb 15;128(6):996-1008. doi: 10.1021/acs.jpca.3c07016. Epub 2024 Jan 18.
9
Excited-State Dynamics Simulations of a Light-Driven Molecular Motor in Solution.溶液中光驱动分子马达的激发态动力学模拟
J Phys Chem A. 2023 Nov 16;127(45):9520-9529. doi: 10.1021/acs.jpca.3c05841. Epub 2023 Nov 2.
10
Temperature effects on the internal conversion of excited adenine and adenosine.温度对激发态腺嘌呤和腺苷内转换的影响。
Phys Chem Chem Phys. 2023 Oct 18;25(40):27083-27093. doi: 10.1039/d3cp03234e.