Zhao Yeyi, Wu Fuzhong, Yang Wanqin, Tan Bo, He Wei
Long-term Research Station of Alpine Forest Ecosystems, Institute of Ecology and Forest, Sichuan Agricultural University, Chengdu 611130, People's Republic of China. Collaborative Innovation Center of Ecological Security in the Upper Reaches of Yangtze River, Chengdu 611130, People's Republic of China.
Can J Microbiol. 2016 Jan;62(1):35-48. doi: 10.1139/cjm-2015-0448. Epub 2015 Oct 22.
Bacterial communities are the primary engineers during litter decomposition and related material cycling, and they can be strongly controlled by seasonal changes in temperature and other environmental factors. However, limited information is available on changes in the bacterial community from winter to the growing season as litter decomposition proceeds in cold climates. Here, we investigated the abundance and structure of bacterial communities using real-time quantitative PCR and denaturing gradient gel electrophoresis (DGGE) during a 2-year field study of the decomposition of litter of 4 species in the winter and growing seasons of an alpine forest of the eastern Tibetan Plateau. The abundance of the bacterial 16S rRNA gene was relatively high during decomposition of cypress and birch litter in the first winter, but for the other litters 16S rRNA abundance during both winters was significantly lower than during the following growing season. A large number of bands were observed on the DGGE gels, and their intensities and number from the winter samples were lower than those from the growing season during the 2-year decomposition experiment. Eighty-nine sequences from the bands of bacteria that had been cut from the DGGE gels were affiliated with 10 distinct classes of bacteria and an unknown group. A redundancy analysis indicated that the moisture, mass loss, and elemental content (e.g., C, N, and P) of the litter significantly affected the bacterial communities. Collectively, the results suggest that uneven seasonal changes in climate regulate bacterial communities and other decomposers, thus affecting their contribution to litter decomposition processes in the alpine forest.
细菌群落是凋落物分解及相关物质循环过程中的主要驱动者,且它们会受到温度季节性变化及其他环境因素的强烈影响。然而,在寒冷气候下,随着凋落物分解的进行,关于从冬季到生长季节细菌群落变化的信息却十分有限。在此,我们在青藏高原东部一片高山森林中,对4种凋落物在冬季和生长季节的分解情况进行了为期2年的野外研究,利用实时定量PCR和变性梯度凝胶电泳(DGGE)技术调查了细菌群落的丰度和结构。在第一个冬季柏木和白桦凋落物分解过程中,细菌16S rRNA基因的丰度相对较高,但对于其他凋落物而言,两个冬季的16S rRNA丰度均显著低于随后的生长季节。在为期2年的分解实验中,DGGE凝胶上观察到大量条带,冬季样品中条带的强度和数量均低于生长季节。从DGGE凝胶上切下的细菌条带的89个序列隶属于10个不同的细菌类群和一个未知类群。冗余分析表明,凋落物的湿度、质量损失和元素含量(如碳、氮和磷)显著影响细菌群落。总体而言,结果表明气候的季节性变化不均调节着细菌群落及其他分解者,从而影响它们对高山森林凋落物分解过程的贡献。