Wei Hua, Peng Changhui, Yang Bin, Song Hanxiong, Li Quan, Jiang Lin, Wei Gang, Wang Kefeng, Wang Hui, Liu Shirong, Liu Xiaojing, Chen Dexiang, Li Yide, Wang Meng
Center for Ecological Forecasting and Global Change, College of Forestry, Northwest A&F University, Yangling, China.
Medical College, Baoji Vocational Technology College, Baoji, China.
Front Microbiol. 2018 Jul 31;9:1693. doi: 10.3389/fmicb.2018.01693. eCollection 2018.
Bacteria are the highest abundant microorganisms in the soil. To investigate bacteria community structures, diversity, and functions, contrasting them in four different seasons all the year round with/within two different forest type soils of China. We analyzed soil bacterial community based on 16S rRNA gene sequencing via Illumina HiSeq platform at a temperate deciduous broad-leaved forest (Baotianman, BTM) and a tropical rainforest (Jianfengling, JFL). We obtained 51,137 operational taxonomic units (OTUs) and classified them into 44 phyla and 556 known genera, 18.2% of which had a relative abundance >1%. The composition in each phylum was similar between the two forest sites. and were the most abundant phyla in the soil samples between the two forest sites. The Shannon index did not significantly differ among the four seasons at BTM or JFL and was higher at BTM than JFL in each season. The bacteria community at both BTM and JFL showed two significant ( < 0.05) predicted functions related to carbon cycle (anoxygenic photoautotrophy sulfur oxidizing and anoxygenic photoautotrophy) and three significant ( < 0.05) predicted functions related to nitrogen cycle (nitrous denitrificaton, nitrite denitrification, and nitrous oxide denitrification). We provide the basis on how changes in bacterial community composition and diversity leading to differences in carbon and nitrogen cycles at the two forests.
细菌是土壤中数量最多的微生物。为了研究细菌群落结构、多样性和功能,在中国两种不同森林类型的土壤中,对全年四个不同季节的细菌进行对比研究。我们通过Illumina HiSeq平台,基于16S rRNA基因测序,分析了温带落叶阔叶林(宝天曼,BTM)和热带雨林(尖峰岭,JFL)的土壤细菌群落。我们获得了51,137个操作分类单元(OTU),并将它们归类为44个门和556个已知属,其中18.2%的属相对丰度>1%。两个森林站点每个门的组成相似。在两个森林站点的土壤样本中, 和 是最丰富的门。香农指数在BTM或JFL的四个季节之间没有显著差异,并且在每个季节中BTM的香农指数都高于JFL。BTM和JFL的细菌群落均显示出与碳循环相关的两个显著( < 0.05)预测功能(无氧光合自养硫氧化和无氧光合自养)以及与氮循环相关的三个显著( < 0.05)预测功能(一氧化二氮反硝化、亚硝酸盐反硝化和一氧化二氮反硝化)。我们为细菌群落组成和多样性的变化如何导致两个森林中碳和氮循环的差异提供了依据。