• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

准确诱导能的小有机分子: 1. 理论。

Accurate Induction Energies for Small Organic Molecules:  1. Theory.

机构信息

University Chemical Laboratory, Lensfield Road, Cambridge CB2 1EW, U.K., and University College London, 20 Gordon Street, London WC1H 0AJ, U.K.

出版信息

J Chem Theory Comput. 2008 Jan;4(1):7-18. doi: 10.1021/ct700104t.

DOI:10.1021/ct700104t
PMID:26619975
Abstract

The induction energy often plays a very important role in determining the structure and properties of clusters of organic molecules, but only in recent years has an effort been made to include this energy in such calculations, notably in the field of organic crystal structure prediction. In this paper and the following one in this issue we provide ab initio methods suitable for the accurate inclusion of the induction energy for molecules containing as many as 30 atoms or so. These techniques are based on Symmetry-Adapted Perturbation Theory using Density Functional Theory [SAPT(DFT)] and use distributed polarizabilities computed using the recently developed density-fitting algorithm with constrained refinement. With this approach we are able to obtain induction models of varying complexity and study the effects of overlap and related numerical issues. Basis set effects on the exact and asymptotic induction energies are investigated, and the roles of higher-order induction energies and many-body effects are explored.

摘要

在确定有机分子团簇的结构和性质时,诱导能常常起着非常重要的作用,但直到近年来,人们才努力在这类计算中纳入这一能量,特别是在有机晶体结构预测领域。在本文和本期的后续文章中,我们提供了适合于准确纳入包含多达 30 个原子左右的分子的诱导能的从头计算方法。这些技术基于使用密度泛函理论的对称性自适应微扰理论(SAPT(DFT)),并使用最近开发的带有约束细化的密度拟合算法来计算分布式极化率。通过这种方法,我们能够获得不同复杂程度的诱导模型,并研究重叠和相关数值问题的影响。我们研究了基组对精确和渐近诱导能的影响,以及高阶诱导能和多体效应的作用。

相似文献

1
Accurate Induction Energies for Small Organic Molecules:  1. Theory.准确诱导能的小有机分子: 1. 理论。
J Chem Theory Comput. 2008 Jan;4(1):7-18. doi: 10.1021/ct700104t.
2
Determination of structure and properties of molecular crystals from first principles.从第一性原理出发确定分子晶体的结构和性质。
Acc Chem Res. 2014 Nov 18;47(11):3266-74. doi: 10.1021/ar500275m. Epub 2014 Oct 29.
3
Proceedings of the Second Workshop on Theory meets Industry (Erwin-Schrödinger-Institute (ESI), Vienna, Austria, 12-14 June 2007).第二届理论与产业研讨会会议录(2007年6月12日至14日,奥地利维也纳埃尔温·薛定谔研究所)
J Phys Condens Matter. 2008 Feb 13;20(6):060301. doi: 10.1088/0953-8984/20/06/060301. Epub 2008 Jan 24.
4
Intermolecular potentials based on symmetry-adapted perturbation theory with dispersion energies from time-dependent density-functional calculations.基于对称适配微扰理论并结合含时密度泛函计算得到的色散能的分子间势。
J Chem Phys. 2005 Dec 1;123(21):214103. doi: 10.1063/1.2135288.
5
Accurate Induction Energies for Small Organic Molecules. 2. Development and Testing of Distributed Polarizability Models against SAPT(DFT) Energies.小分子精确诱导能。2. 针对 SAPT(DFT)能量的分布式极化率模型的开发和测试。
J Chem Theory Comput. 2008 Jan;4(1):19-32. doi: 10.1021/ct700105f.
6
Extrapolation and Scaling of the DFT-SAPT Interaction Energies toward the Basis Set Limit.DFT-SAPT 相互作用能的外推和缩放至基组极限。
J Chem Theory Comput. 2011 Mar 8;7(3):685-9. doi: 10.1021/ct200005p. Epub 2011 Feb 10.
7
Interaction energies between glycopeptide antibiotics and substrates in complexes determined by X-ray crystallography: application of a theoretical databank of aspherical atoms and a symmetry-adapted perturbation theory-based set of interatomic potentials.通过X射线晶体学确定的糖肽类抗生素与复合物中底物之间的相互作用能:非球形原子理论数据库和基于对称适应微扰理论的原子间势集的应用。
Acta Crystallogr D Biol Crystallogr. 2006 Jun;62(Pt 6):639-47. doi: 10.1107/S0907444906013072. Epub 2006 May 12.
8
Density-functional theory-symmetry-adapted intermolecular perturbation theory with density fitting: a new efficient method to study intermolecular interaction energies.密度泛函理论-密度拟合对称适配分子间微扰理论:一种研究分子间相互作用能的高效新方法。
J Chem Phys. 2005 Jan 1;122(1):14103. doi: 10.1063/1.1824898.
9
Symmetry-adapted perturbation-theory calculations of intermolecular forces employing density-functional description of monomers.采用单体密度泛函描述的分子间力的对称适配微扰理论计算。
J Chem Phys. 2005 Jun 1;122(21):214109. doi: 10.1063/1.1924593.
10
Interaction potential for water dimer from symmetry-adapted perturbation theory based on density functional description of monomers.基于单体密度泛函描述的对称适应微扰理论得到的水二聚体的相互作用势。
J Chem Phys. 2006 Jul 28;125(4):44301. doi: 10.1063/1.2220040.

引用本文的文献

1
Correlation effects and many-body interactions in water clusters.水团簇中的关联效应和多体相互作用。
Beilstein J Org Chem. 2018 May 2;14:979-991. doi: 10.3762/bjoc.14.83. eCollection 2018.
2
Four Polymorphs of Methyl Paraben: Structural Relationships and Relative Energy Differences.对羟基苯甲酸甲酯的四种多晶型物:结构关系与相对能量差异
Cryst Growth Des. 2013 Mar 6;13(3):1206-1217. doi: 10.1021/cg301639r. Epub 2013 Jan 28.
3
Molecular simulation methods in drug discovery: a prospective outlook.药物发现中的分子模拟方法:前瞻性展望。
J Comput Aided Mol Des. 2012 Jan;26(1):81-6. doi: 10.1007/s10822-011-9506-1. Epub 2011 Dec 8.
4
Polarizable intermolecular potentials for water and benzene interacting with halide and metal ions.水和苯与卤化物及金属离子相互作用的可极化分子间势
J Chem Theory Comput. 2009 Jan 1;5(11):3022-3031. doi: 10.1021/ct9004189.