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水溶液中锍盐和铵盐甲基转移反应精确活化能垒的计算。

Computation of Accurate Activation Barriers for Methyl-Transfer Reactions of Sulfonium and Ammonium Salts in Aqueous Solution.

作者信息

Gunaydin Hakan, Acevedo Orlando, Jorgensen William L, Houk K N

机构信息

Department of Chemistry and Biochemistry, University of California, Los Angeles, California 90095-1569, and Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520-8107.

出版信息

J Chem Theory Comput. 2007 May;3(3):1028-35. doi: 10.1021/ct050318n.

Abstract

The energetics of methyl-transfer reactions from dimethylammonium, tetramethylammonium, and trimethylsulfonium to dimethylamine were computed with density functional theory, MP2, CBS-QB3, and quantum mechanics/molecular mechanics (QM/MM) Monte Carlo methods. At the CBS-QB3 level, the gas-phase activation enthalpies are computed to be 9.9, 15.3, and 7.9 kcal/mol, respectively. MP2/6-31+G(d,p) activation enthalpies are in best agreement with the CBS-QB3 results. The effects of aqueous solvation on these reactions were studied with polarizable continuum model, generalized Born/surface area (GB/SA), and QM/MM Monte Carlo simulations utilizing free-energy perturbation theory in which the PDDG/PM3 semiempirical Hamiltonian for the QM and explicit TIP4P water molecules in the MM region were used. In the aqueous phase, all of these reactions proceed more slowly when compared to the gas phase, since the charged reactants are stabilized more than the transition structure geometries with delocalized positive charges. In order to obtain the aqueous-phase activation free energies, the gas-phase activation free energies were corrected with the solvation free energies obtained from single-point conductor-like polarizable continuum model and GB/SA calculations for the stationary points along the reaction coordinate.

摘要

采用密度泛函理论、MP2、CBS-QB3以及量子力学/分子力学(QM/MM)蒙特卡罗方法,计算了从二甲基铵、四甲基铵和三甲基锍到二甲胺的甲基转移反应的能量学。在CBS-QB3水平下,计算得到气相活化焓分别为9.9、15.3和7.9 kcal/mol。MP2/6-31+G(d,p)活化焓与CBS-QB3结果最为吻合。利用极化连续介质模型、广义玻恩/表面积(GB/SA)以及采用自由能微扰理论的QM/MM蒙特卡罗模拟,研究了水溶剂化对这些反应的影响,其中QM使用PDDG/PM3半经验哈密顿量,MM区域使用显式TIP4P水分子。在水相中,与气相相比,所有这些反应进行得更慢,因为带电反应物比具有离域正电荷的过渡结构几何形状更稳定。为了获得水相活化自由能,利用从单点导体类极化连续介质模型和GB/SA计算得到的沿反应坐标的驻点的溶剂化自由能,对气相活化自由能进行了校正。

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