Griffin M J, Reichley S R, Greenway T E, Quiniou S M, Ware C, Gao D X, Gaunt P S, Yanong R P E, Pouder D B, Hawke J P, Soto E
Thad Cochran National Warmwater Aquaculture Center, Mississippi State University, Stoneville, MS, USA.
Thad Cochran National Warmwater Aquaculture Center, Warmwater Aquaculture Research Unit, Agricultural Research Service, United States Department of Agriculture, Stoneville, MS, USA.
J Fish Dis. 2016 Aug;39(8):947-69. doi: 10.1111/jfd.12431. Epub 2015 Dec 14.
The intraspecific variability of E. ictaluri isolates from different origins was investigated. Isolates were recovered from farm-raised catfish (Ictalurus punctatus) in Mississippi, USA, tilapia (Oreochromis niloticus) cultured in the Western Hemisphere and zebrafish (Danio rerio) propagated in Florida, USA. These isolates were phenotypically homologous and antimicrobial profiles were largely similar. Genetically, isolates possessed differences that could be exploited by repetitive-sequence-mediated PCR and gyrB sequence, which identified three distinct E. ictaluri genotypes: one associated with catfish, one from tilapia and a third from zebrafish. Plasmid profiles were also group specific and correlated with rep-PCR and gyrB sequences. The catfish isolates possessed profiles typical of those described for E. ictaluri isolates; however, plasmids from the zebrafish and tilapia isolates differed in both composition and arrangement. Furthermore, some zebrafish and tilapia isolates were PCR negative for several E. ictaluri virulence factors. Isolates were serologically heterogenous, as serum from a channel catfish exposed to a catfish isolate had reduced antibody activity to tilapia and zebrafish isolates. This work identifies three genetically distinct strains of E. ictaluri from different origins using rep-PCR, 16S, gyrB and plasmid sequencing, in addition to antimicrobial and serological profiling.
对来自不同来源的斑点叉尾鮰分离株的种内变异性进行了研究。分离株分别从美国密西西比州养殖的鲶鱼(斑点叉尾鮰)、西半球养殖的罗非鱼(尼罗罗非鱼)以及美国佛罗里达州繁殖的斑马鱼(斑马丹鱼)中获得。这些分离株在表型上具有同源性,抗菌谱也基本相似。在基因方面,分离株存在差异,可通过重复序列介导的聚合酶链反应和gyrB序列来区分,鉴定出三种不同的斑点叉尾鮰基因型:一种与鲶鱼相关,一种来自罗非鱼,第三种来自斑马鱼。质粒图谱也具有群体特异性,并与重复序列聚合酶链反应和gyrB序列相关。鲶鱼分离株具有斑点叉尾鮰分离株所描述的典型图谱;然而,斑马鱼和罗非鱼分离株的质粒在组成和排列上均有所不同。此外,一些斑马鱼和罗非鱼分离株对几种斑点叉尾鮰毒力因子的聚合酶链反应呈阴性。分离株在血清学上具有异质性,因为暴露于鲶鱼分离株的沟鲶血清对罗非鱼和斑马鱼分离株的抗体活性降低。这项工作除了进行抗菌和血清学分析外,还利用重复序列聚合酶链反应、16S、gyrB和质粒测序鉴定了来自不同来源的三种基因不同的斑点叉尾鮰菌株。