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利用不变价数据库和一种新的分段刚体分析程序估算温度依赖性各向异性氢位移。

Estimating temperature-dependent anisotropic hydrogen displacements with the invariom database and a new segmented rigid-body analysis program.

作者信息

Lübben Jens, Bourhis Luc J, Dittrich Birger

机构信息

Institut für Anorganische und Angewandte Chemie, Martin-Luther-King-Platz 6, 20146 Hamburg, Germany.

Bruker-AXS SAS, 4 Allée Lorents, F-77447 Marne-la-Vallée, France.

出版信息

J Appl Crystallogr. 2015 Nov 10;48(Pt 6):1785-1793. doi: 10.1107/S1600576715018075. eCollection 2015 Dec 1.

Abstract

Invariom partitioning and notation are used to estimate anisotropic hydrogen displacements for incorporation in crystallographic refinement models. Optimized structures of the generalized invariom database and their frequency computations provide the information required: frequencies are converted to internal atomic displacements and combined with the results of a TLS (translation-libration-screw) fit of experimental non-hydrogen anisotropic displacement parameters to estimate those of H atoms. Comparison with TLS+ONIOM and neutron diffraction results for four example structures where high-resolution X-ray and neutron data are available show that electron density transferability rules established in the invariom approach are also suitable for streamlining the transfer of atomic vibrations. A new segmented-body TLS analysis program called has been coded to overcome technical limitations of the established program . The influence of incorporating hydrogen anisotropic displacement parameters on conventional refinement is assessed.

摘要

Invariom 分区和符号用于估计各向异性氢位移,以便纳入晶体学精修模型。广义 Invariom 数据库的优化结构及其频率计算提供了所需信息:频率被转换为内部原子位移,并与实验非氢各向异性位移参数的 TLS(平移-振动-螺旋)拟合结果相结合,以估计氢原子的位移。对四个可获得高分辨率 X 射线和中子数据的示例结构与 TLS+ONIOM 和中子衍射结果进行比较,表明 Invariom 方法中建立的电子密度转移性规则也适用于简化原子振动的转移。已编写了一个名为 的新的分段体 TLS 分析程序,以克服现有程序的技术限制。评估了纳入氢各向异性位移参数对传统精修的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/623a/4665659/391412486f37/j-48-01785-fig1.jpg

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