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一种确定蛋白质微小遗传修饰功能影响的新方法。

A Novel Method of Determining the Functional Effects of a Minor Genetic Modification of a Protein.

机构信息

Department of Cell Biology, Center for Commercialization of Fluorescence Technologies, University of North Texas Health Science Center , Fort Worth, TX , USA.

Department of Mathematics, Computer Science, and Physics, Texas Wesleyan University , Fort Worth, TX , USA.

出版信息

Front Cardiovasc Med. 2015 Nov 18;2:35. doi: 10.3389/fcvm.2015.00035. eCollection 2015.

DOI:10.3389/fcvm.2015.00035
PMID:26664906
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4671333/
Abstract

Contraction of muscles results from the ATP-coupled cyclic interactions of the myosin cross-bridges with actin filaments. Macroscopic parameters of contraction, such as maximum tension, speed of shortening, or ATPase activity, are unlikely to reveal differences between the wild-type and mutated (MUT) proteins when the level of transgenic protein expression is low. This is because macroscopic measurements are made on whole organs containing trillions of actin and myosin molecules. An average of the information collected from such a large assembly is bound to conceal any differences imposed by a small fraction of MUT molecules. To circumvent the averaging problem, the measurements were done on isolated ventricular myofibril (MF) in which thin filaments were sparsely labeled with a fluorescent dye. We isolated a single MF from a ventricle, oriented it vertically (to be able measure the orientation), and labeled 1 in 100,000 actin monomers with a fluorescent dye. We observed the fluorescence from a small confocal volume containing approximately three actin molecules. During the contraction of a ventricle actin constantly changes orientation (i.e., the transition moment of rigidly attached fluorophore fluctuates in time) because it is repetitively being "kicked" by myosin cross-bridges. An autocorrelation functions (ACFs) of these fluctuations are remarkably sensitive to the mutation of myosin. We examined the effects of Alanine to Threonine (A13T) mutation in the myosin regulatory light chain shown by population studies to cause hypertrophic cardiomyopathy. This is an appropriate example, because mutation is expressed at only 10% in the ventricles of transgenic mice. ACFs were either "Standard" (Std) (decaying monotonically in time) or "Non-standard" (NStd) (decaying irregularly). The sparse labeling of actin also allowed the measurement of the spatial distribution of actin molecules. Such distribution reflects the interaction of actin with myosin cross-bridges and is also remarkably sensitive to myosin mutation. The result showed that the A13T mutation caused 9% ACFs and 9% of spatial distributions of actin to be NStd, while the remaining 91% were Std, suggesting that the NStd performances were executed by the MUT myosin heads and that the Std performances were executed by non-MUT myosin heads. We conclude that the method explored in this study is a sensitive and valid test of the properties of low prevalence mutations in sarcomeric proteins.

摘要

肌肉收缩是由肌球蛋白横桥与肌动蛋白丝的 ATP 偶联循环相互作用引起的。当转基因蛋白表达水平较低时,收缩的宏观参数,如最大张力、缩短速度或 ATP 酶活性,不太可能揭示野生型和突变型(MUT)蛋白之间的差异。这是因为宏观测量是在包含数万亿个肌动蛋白和肌球蛋白分子的整个器官上进行的。从这样一个大型组件收集的信息的平均值必然会掩盖由一小部分 MUT 分子施加的任何差异。为了避免平均问题,我们在分离的心室肌原纤维(MF)上进行了测量,其中薄丝用荧光染料稀疏标记。我们从心室中分离出一个 MF,将其垂直定向(以便能够测量取向),并用荧光染料标记 100,000 个肌动蛋白单体中的 1 个。我们观察了包含大约三个肌动蛋白分子的小共焦体积的荧光。在心室收缩过程中,肌动蛋白不断改变取向(即刚性附着荧光团的跃迁时刻随时间波动),因为它不断被肌球蛋白横桥“踢动”。这些波动的自相关函数(ACFs)对肌球蛋白的突变非常敏感。我们检查了肌球蛋白调节轻链中的丙氨酸到苏氨酸(A13T)突变的影响,该突变在人群研究中显示会导致肥厚型心肌病。这是一个合适的例子,因为突变在转基因小鼠的心室中仅表达 10%。ACFs 要么是“标准”(Std)(随时间单调衰减),要么是“非标准”(NStd)(不规则衰减)。肌动蛋白的稀疏标记还允许测量肌动蛋白分子的空间分布。这种分布反映了肌动蛋白与肌球蛋白横桥的相互作用,并且对肌球蛋白突变也非常敏感。结果表明,A13T 突变导致 9%的 ACFs 和 9%的肌动蛋白空间分布为 NStd,而其余 91%为 Std,这表明 NStd 表现由 MUT 肌球蛋白头执行,而 Std 表现由非 MUT 肌球蛋白头执行。我们得出结论,本研究中探索的方法是对肌节蛋白中低流行突变特性的敏感且有效的测试。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/b7bcab7d3ec7/fcvm-02-00035-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/8c8acb354a90/fcvm-02-00035-g001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/1128d1eda5d0/fcvm-02-00035-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/ebfa2fd499d9/fcvm-02-00035-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/b7bcab7d3ec7/fcvm-02-00035-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/8c8acb354a90/fcvm-02-00035-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/14b680b17501/fcvm-02-00035-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/1c8fbf67e6db/fcvm-02-00035-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/bc0891df748c/fcvm-02-00035-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/1128d1eda5d0/fcvm-02-00035-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/ebfa2fd499d9/fcvm-02-00035-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb3/4671333/b7bcab7d3ec7/fcvm-02-00035-g007.jpg

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本文引用的文献

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Constitutive phosphorylation of cardiac myosin regulatory light chain prevents development of hypertrophic cardiomyopathy in mice.心肌肌球蛋白调节轻链的组成型磷酸化可预防小鼠肥厚型心肌病的发生。
Proc Natl Acad Sci U S A. 2015 Jul 28;112(30):E4138-46. doi: 10.1073/pnas.1505819112. Epub 2015 Jun 29.
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Myosin regulatory light chain mutation found in hypertrophic cardiomyopathy patients increases isometric force production in transgenic mice.在肥厚型心肌病患者中发现的肌球蛋白调节轻链突变增加了转基因小鼠的等长力产生。
Biochem J. 2012 Feb 15;442(1):95-103. doi: 10.1042/BJ20111145.
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Cross-bridge kinetics in myofibrils containing familial hypertrophic cardiomyopathy R58Q mutation in the regulatory light chain of myosin.
含有肌球蛋白调节轻链家族性肥厚型心肌病 R58Q 突变的肌原纤维中的横桥动力学。
J Theor Biol. 2011 Sep 7;284(1):71-81. doi: 10.1016/j.jtbi.2011.06.014. Epub 2011 Jun 24.
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Familial hypertrophic cardiomyopathy can be characterized by a specific pattern of orientation fluctuations of actin molecules .家族性肥厚型心肌病的特征可以是肌动蛋白分子特定的取向波动模式。
Biochemistry. 2010 Jun 29;49(25):5269-77. doi: 10.1021/bi1006749.
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Genetic basis of hypertrophic cardiomyopathy: from bench to the clinics.肥厚型心肌病的遗传基础:从实验室到临床
J Cardiovasc Electrophysiol. 2008 Jan;19(1):104-10. doi: 10.1111/j.1540-8167.2007.00965.x. Epub 2007 Oct 4.
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Rotation of actin monomers during isometric contraction of skeletal muscle.骨骼肌等长收缩过程中肌动蛋白单体的旋转
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The molecular mechanism of muscle contraction.肌肉收缩的分子机制。
Adv Protein Chem. 2005;71:161-93. doi: 10.1016/S0065-3233(04)71005-0.
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One third of Danish hypertrophic cardiomyopathy patients with MYH7 mutations have mutations [corrected] in MYH7 rod region.三分之一携带MYH7突变的丹麦肥厚型心肌病患者在MYH7杆状区域存在突变。 [已修正]
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