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内皮机械敏感基因在动脉粥样硬化中的作用及组学方法

The role of endothelial mechanosensitive genes in atherosclerosis and omics approaches.

作者信息

Simmons Rachel D, Kumar Sandeep, Jo Hanjoong

机构信息

Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA.

Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA, USA; Division of Cardiology, Emory University, Atlanta, GA, USA.

出版信息

Arch Biochem Biophys. 2016 Feb 1;591:111-31. doi: 10.1016/j.abb.2015.11.005. Epub 2015 Dec 11.

Abstract

Atherosclerosis is the leading cause of morbidity and mortality in the U.S., and is a multifactorial disease that preferentially occurs in regions of the arterial tree exposed to disturbed blood flow. The detailed mechanisms by which d-flow induces atherosclerosis involve changes in the expression of genes, epigenetic patterns, and metabolites of multiple vascular cells, especially endothelial cells. This review presents an overview of endothelial mechanobiology and its relation to the pathogenesis of atherosclerosis with special reference to the anatomy of the artery and the underlying fluid mechanics, followed by a discussion of a variety of experimental models to study the role of fluid mechanics and atherosclerosis. Various in vitro and in vivo models to study the role of flow in endothelial biology and pathobiology are discussed in this review. Furthermore, strategies used for the global profiling of the genome, transcriptome, miR-nome, DNA methylome, and metabolome, as they are important to define the biological and pathophysiological mechanisms of atherosclerosis. These "omics" approaches, especially those which derive data based on a single animal model, provide unprecedented opportunities to not only better understand the pathophysiology of atherosclerosis development in a holistic and integrative manner, but also to identify novel molecular and diagnostic targets.

摘要

动脉粥样硬化是美国发病和死亡的主要原因,是一种多因素疾病,优先发生在动脉树中血流紊乱的区域。血流紊乱诱导动脉粥样硬化的详细机制涉及多种血管细胞,尤其是内皮细胞的基因表达、表观遗传模式和代谢物的变化。本综述概述了内皮细胞力学生物学及其与动脉粥样硬化发病机制的关系,特别提及了动脉的解剖结构和潜在的流体力学,随后讨论了各种用于研究流体力学与动脉粥样硬化作用的实验模型。本综述讨论了各种用于研究血流在内皮生物学和病理生物学中作用的体外和体内模型。此外,用于基因组、转录组、微小RNA组、DNA甲基化组和代谢组全局分析的策略,因为它们对于定义动脉粥样硬化的生物学和病理生理机制很重要。这些“组学”方法,尤其是那些基于单一动物模型获取数据的方法,不仅提供了前所未有的机会,以全面和综合的方式更好地理解动脉粥样硬化发展的病理生理学,还能识别新的分子和诊断靶点。

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