Wallqvist Anders, Memišević Vesna, Zavaljevski Nela, Pieper Rembert, Rajagopala Seesandra V, Kwon Keehwan, Yu Chenggang, Hoover Timothy A, Reifman Jaques
Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA.
J. Craig Venter Institute, Rockville, MD, 20850, USA.
BMC Genomics. 2015 Dec 29;16:1106. doi: 10.1186/s12864-015-2351-1.
Francisella tularensis is a select bio-threat agent and one of the most virulent intracellular pathogens known, requiring just a few organisms to establish an infection. Although several virulence factors are known, we lack an understanding of virulence factors that act through host-pathogen protein interactions to promote infection. To address these issues in the highly infectious F. tularensis subsp. tularensis Schu S4 strain, we deployed a combined in silico, in vitro, and in vivo analysis to identify virulence factors and their interactions with host proteins to characterize bacterial infection mechanisms.
We initially used comparative genomics and literature to identify and select a set of 49 putative and known virulence factors for analysis. Each protein was then subjected to proteome-scale yeast two-hybrid (Y2H) screens with human and murine cDNA libraries to identify potential host-pathogen protein-protein interactions. Based on the bacterial protein interaction profile with both hosts, we selected seven novel putative virulence factors for mutant construction and animal validation experiments. We were able to create five transposon insertion mutants and used them in an intranasal BALB/c mouse challenge model to establish 50 % lethal dose estimates. Three of these, ΔFTT0482c, ΔFTT1538c, and ΔFTT1597, showed attenuation in lethality and can thus be considered novel F. tularensis virulence factors. The analysis of the accompanying Y2H data identified intracellular protein trafficking between the early endosome to the late endosome as an important component in virulence attenuation for these virulence factors. Furthermore, we also used the Y2H data to investigate host protein binding of two known virulence factors, showing that direct protein binding was a component in the modulation of the inflammatory response via activation of mitogen-activated protein kinases and in the oxidative stress response.
Direct interactions with specific host proteins and the ability to influence interactions among host proteins are important components for F. tularensis to avoid host-cell defense mechanisms and successfully establish an infection. Although direct host-pathogen protein-protein binding is only one aspect of Francisella virulence, it is a critical component in directly manipulating and interfering with cellular processes in the host cell.
土拉弗朗西斯菌是一种特定的生物威胁病原体,也是已知的最具毒性的细胞内病原体之一,只需少量菌体就能引发感染。尽管已知有几种毒力因子,但我们对通过宿主 - 病原体蛋白相互作用促进感染的毒力因子仍缺乏了解。为了解决高传染性的土拉弗朗西斯菌亚种土拉弗朗西斯菌舒S4菌株中的这些问题,我们采用了计算机模拟、体外和体内分析相结合的方法来鉴定毒力因子及其与宿主蛋白的相互作用,以表征细菌感染机制。
我们最初使用比较基因组学和文献来鉴定并选择了一组49个推定的和已知的毒力因子进行分析。然后,对每个蛋白质进行蛋白质组规模的酵母双杂交(Y2H)筛选,分别与人及小鼠cDNA文库进行杂交,以鉴定潜在的宿主 - 病原体蛋白 - 蛋白相互作用。基于细菌蛋白与两种宿主的相互作用谱,我们选择了七个新的推定毒力因子用于突变体构建和动物验证实验。我们成功构建了五个转座子插入突变体,并将它们用于鼻内BALB/c小鼠攻击模型以确定50%致死剂量。其中三个,即ΔFTT0482c、ΔFTT1538c和ΔFTT1597,显示出致死率降低,因此可被视为新的土拉弗朗西斯菌毒力因子。对伴随的Y2H数据的分析确定,早期内体到晚期内体之间的细胞内蛋白运输是这些毒力因子毒力减弱的一个重要组成部分。此外,我们还利用Y2H数据研究了两种已知毒力因子与宿主蛋白的结合,结果表明直接蛋白结合是通过激活丝裂原活化蛋白激酶来调节炎症反应以及氧化应激反应的一个组成部分。
与特定宿主蛋白的直接相互作用以及影响宿主蛋白之间相互作用的能力是土拉弗朗西斯菌避免宿主细胞防御机制并成功建立感染的重要组成部分。虽然直接的宿主 - 病原体蛋白 - 蛋白结合只是弗朗西斯菌毒力的一个方面,但它是直接操纵和干扰宿主细胞内细胞过程的关键组成部分。