• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

体外培养对马来布鲁线虫成虫转录组的影响

The Effect of In Vitro Cultivation on the Transcriptome of Adult Brugia malayi.

作者信息

Ballesteros Cristina, Tritten Lucienne, O'Neill Maeghan, Burkman Erica, Zaky Weam I, Xia Jianguo, Moorhead Andrew, Williams Steven A, Geary Timothy G

机构信息

Institute of Parasitology, Centre for Host-Parasite Interactions, McGill University, Sainte-Anne-de-Bellevue, Quebec, Canada.

Department of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, Georgia, United States of America.

出版信息

PLoS Negl Trop Dis. 2016 Jan 4;10(1):e0004311. doi: 10.1371/journal.pntd.0004311. eCollection 2016 Jan.

DOI:10.1371/journal.pntd.0004311
PMID:26727204
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4699822/
Abstract

BACKGROUND

Filarial nematodes cause serious and debilitating infections in human populations of tropical countries, contributing to an entrenched cycle of poverty. Only one human filarial parasite, Brugia malayi, can be maintained in rodents in the laboratory setting. It has been a widely used model organism in experiments that employ culture systems, the impact of which on the worms is unknown.

METHODOLOGY/PRINCIPAL FINDINGS: Using Illumina RNA sequencing, we characterized changes in gene expression upon in vitro maintenance of adult B. malayi female worms at four time points: immediately upon removal from the host, immediately after receipt following shipment, and after 48 h and 5 days in liquid culture media. The dramatic environmental change and the 24 h time lapse between removal from the host and establishment in culture caused a globally dysregulated gene expression profile. We found a maximum of 562 differentially expressed genes based on pairwise comparison between time points. After an initial shock upon removal from the host and shipping, a few stress fingerprints remained after 48 h in culture and until the experiment was stopped. This was best illustrated by a strong and persistent up-regulation of several genes encoding cuticle collagens, as well as serpins.

CONCLUSIONS/SIGNIFICANCE: These findings suggest that B. malayi can be maintained in culture as a valid system for pharmacological and biological studies, at least for several days after removal from the host and adaptation to the new environment. However, genes encoding several stress indicators remained dysregulated until the experiment was stopped.

摘要

背景

丝虫线虫在热带国家的人群中引发严重且使人衰弱的感染,导致贫困的恶性循环难以消除。在实验室环境中,只有一种人体丝虫寄生虫——马来布鲁线虫能够在啮齿动物体内维持存活。它一直是在采用培养系统的实验中广泛使用的模式生物,但其对蠕虫的影响尚不清楚。

方法/主要发现:我们使用Illumina RNA测序技术,对成年马来布鲁线虫雌性蠕虫在体外培养的四个时间点的基因表达变化进行了表征:从宿主取出后立即、运输后接收时、在液体培养基中培养48小时和5天后。从宿主取出到在培养环境中建立之间剧烈的环境变化和24小时的时间间隔导致了整体基因表达谱失调。基于时间点之间的成对比较,我们发现最多有562个差异表达基因。从宿主取出并运输后最初的冲击过后,培养48小时直至实验结束,仍有一些应激特征存在。这最明显地表现为几个编码表皮胶原蛋白以及丝氨酸蛋白酶抑制剂的基因持续强烈上调。

结论/意义:这些发现表明,马来布鲁线虫可以在培养中作为药理学和生物学研究的有效系统维持存活,至少在从宿主取出并适应新环境后的几天内如此。然而,直到实验结束,几个编码应激指标的基因仍处于失调状态。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/16d3d0bd9f98/pntd.0004311.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/3d234d9bdd66/pntd.0004311.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/6a9d69834633/pntd.0004311.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/2816b7ce0e99/pntd.0004311.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/53d3e974af19/pntd.0004311.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/16d3d0bd9f98/pntd.0004311.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/3d234d9bdd66/pntd.0004311.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/6a9d69834633/pntd.0004311.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/2816b7ce0e99/pntd.0004311.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/53d3e974af19/pntd.0004311.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97b7/4699822/16d3d0bd9f98/pntd.0004311.g005.jpg

相似文献

1
The Effect of In Vitro Cultivation on the Transcriptome of Adult Brugia malayi.体外培养对马来布鲁线虫成虫转录组的影响
PLoS Negl Trop Dis. 2016 Jan 4;10(1):e0004311. doi: 10.1371/journal.pntd.0004311. eCollection 2016 Jan.
2
A deep sequencing approach to comparatively analyze the transcriptome of lifecycle stages of the filarial worm, Brugia malayi.一种深度测序方法,用于比较分析丝虫,马来布鲁线虫生命周期各阶段的转录组。
PLoS Negl Trop Dis. 2011 Dec;5(12):e1409. doi: 10.1371/journal.pntd.0001409. Epub 2011 Dec 13.
3
Effects of doxycycline on gene expression in Wolbachia and Brugia malayi adult female worms in vivo.多西环素对体内沃尔巴克氏体和曼氏血吸虫成虫基因表达的影响。
J Biomed Sci. 2012 Feb 9;19(1):21. doi: 10.1186/1423-0127-19-21.
4
Transcription profiling reveals stage- and function-dependent expression patterns in the filarial nematode Brugia malayi.转录谱分析揭示了丝虫科线虫马来布鲁线虫的阶段和功能依赖性表达模式。
BMC Genomics. 2012 May 14;13:184. doi: 10.1186/1471-2164-13-184.
5
Defining Brugia malayi and Wolbachia symbiosis by stage-specific dual RNA-seq.通过阶段特异性双RNA测序定义马来布鲁线虫与沃尔巴克氏体共生关系。
PLoS Negl Trop Dis. 2017 Mar 30;11(3):e0005357. doi: 10.1371/journal.pntd.0005357. eCollection 2017 Mar.
6
Differential transcript expression between the microfilariae of the filarial nematodes, Brugia malayi and B. pahangi.班氏丝虫和马来丝虫微丝蚴之间的差异转录表达。
BMC Genomics. 2010 Apr 7;11:225. doi: 10.1186/1471-2164-11-225.
7
Use of microarray hybridization to identify Brugia genes involved in mosquito infectivity.利用微阵列杂交技术鉴定参与蚊子感染的班氏丝虫基因。
Parasitol Res. 2009 Dec;106(1):227-35. doi: 10.1007/s00436-009-1655-y. Epub 2009 Nov 6.
8
Infectivity and normal development of third stage Brugia malayi maintained in vitro.体外培养的马来布鲁线虫第三期幼虫的感染性及正常发育
J Parasitol. 1994 Dec;80(6):891-4.
9
Yeast-Based High-Throughput Screens to Identify Novel Compounds Active against Brugia malayi.基于酵母的高通量筛选以鉴定对马来布鲁线虫有效的新型化合物。
PLoS Negl Trop Dis. 2016 Jan 26;10(1):e0004401. doi: 10.1371/journal.pntd.0004401. eCollection 2016 Jan.
10
Dual RNAseq analyses at soma and germline levels reveal evolutionary innovations in the elephantiasis-agent Brugia malayi, and adaptation of its Wolbachia endosymbionts.双重 RNA 测序分析在体和生殖细胞水平揭示了象皮病病原体班氏吴策线虫的进化创新,以及其沃尔巴克氏体共生菌的适应。
PLoS Negl Trop Dis. 2021 Jan 6;15(1):e0008935. doi: 10.1371/journal.pntd.0008935. eCollection 2021 Jan.

引用本文的文献

1
Updated annotation and meta-analysis of Brugia malayi transcriptomics data reveals consistent transcriptional profiles across time and space with some study-specific differences in adult female worm transcriptional profiles.对班氏丝虫转录组数据的更新注释和荟萃分析显示,随着时间和空间的推移,转录谱具有一致性,但在成虫雌虫转录谱方面存在一些研究特异性差异。
PLoS Negl Trop Dis. 2024 Sep 26;18(9):e0012511. doi: 10.1371/journal.pntd.0012511. eCollection 2024 Sep.
2
Dirofilariasis mouse models for heartworm preclinical research.用于犬心丝虫临床前研究的丝虫病小鼠模型。
Front Microbiol. 2023 Jun 22;14:1208301. doi: 10.3389/fmicb.2023.1208301. eCollection 2023.
3

本文引用的文献

1
In vitro flubendazole-induced damage to vital tissues in adult females of the filarial nematode Brugia malayi.体外氟苯达唑对丝虫马来布鲁线虫成年雌性重要组织的损伤。
Int J Parasitol Drugs Drug Resist. 2015 Jul 7;5(3):135-40. doi: 10.1016/j.ijpddr.2015.06.002. eCollection 2015 Dec.
2
NetworkAnalyst for statistical, visual and network-based meta-analysis of gene expression data.网络分析用于基因表达数据的统计、可视化和基于网络的荟萃分析。
Nat Protoc. 2015 Jun;10(6):823-44. doi: 10.1038/nprot.2015.052. Epub 2015 May 7.
3
Notch signaling as a novel regulator of metabolism.
Pharmacological Profiling of a Brugia malayi Muscarinic Acetylcholine Receptor as a Putative Antiparasitic Target.
布氏冈比亚按蚊毒蕈碱型乙酰胆碱受体的药理学特性分析及其作为潜在抗寄生虫靶点的研究。
Antimicrob Agents Chemother. 2023 Jan 24;67(1):e0118822. doi: 10.1128/aac.01188-22. Epub 2023 Jan 5.
4
A mouse infection model and long-term lymphatic endothelium co-culture system to evaluate drugs against adult Brugia malayi.用于评估抗成人班氏丝虫药物的小鼠感染模型和长期淋巴管内皮细胞共培养系统。
PLoS Negl Trop Dis. 2022 Jun 7;16(6):e0010474. doi: 10.1371/journal.pntd.0010474. eCollection 2022 Jun.
5
Comparative analysis on transcriptomics of ivermectin resistant and susceptible strains of Haemonchus contortus.伊维菌素耐药和敏感捻转血矛线虫转录组的比较分析。
Parasit Vectors. 2022 May 7;15(1):159. doi: 10.1186/s13071-022-05274-y.
6
Spatial transcriptomics reveals antiparasitic targets associated with essential behaviors in the human parasite Brugia malayi.空间转录组学揭示了与人体寄生虫班氏丝虫重要行为相关的抗寄生虫靶点。
PLoS Pathog. 2022 Apr 7;18(4):e1010399. doi: 10.1371/journal.ppat.1010399. eCollection 2022 Apr.
7
Phylum-Spanning Neuropeptide GPCR Identification and Prioritization: Shaping Drug Target Discovery Pipelines for Nematode Parasite Control.跨门神经肽 GPCR 的鉴定和优先级划分:为线虫寄生虫控制塑造药物靶点发现管道。
Front Endocrinol (Lausanne). 2021 Sep 30;12:718363. doi: 10.3389/fendo.2021.718363. eCollection 2021.
8
Effects of diethylcarbamazine and ivermectin treatment on gene expression in infected gerbils ().乙胺嗪和伊维菌素治疗对感染沙鼠基因表达的影响()。
Parasitol Open. 2019;5. doi: 10.1017/pao.2019.1. Epub 2019 Mar 8.
9
Genetic and functional diversification of chemosensory pathway receptors in mosquito-borne filarial nematodes.化学感觉途径受体在蚊媒丝虫中的遗传和功能多样化。
PLoS Biol. 2020 Jun 8;18(6):e3000723. doi: 10.1371/journal.pbio.3000723. eCollection 2020 Jun.
10
Comparative analysis of small RNAs released by the filarial nematode Litomosoides sigmodontis in vitro and in vivo.对比分析丝虫在体外和体内释放的小 RNA。
PLoS Negl Trop Dis. 2019 Nov 26;13(11):e0007811. doi: 10.1371/journal.pntd.0007811. eCollection 2019 Nov.
Notch信号通路作为一种新型的代谢调节因子。
Trends Endocrinol Metab. 2015 May;26(5):248-55. doi: 10.1016/j.tem.2015.02.006. Epub 2015 Mar 21.
4
Targeting Filarial Abl-like Kinases: Orally Available, Food and Drug Administration-Approved Tyrosine Kinase Inhibitors Are Microfilaricidal and Macrofilaricidal.靶向丝虫 Abl 样激酶:口服可用、美国食品药品监督管理局批准的酪氨酸激酶抑制剂具有杀微丝蚴和杀成虫作用。
J Infect Dis. 2015 Sep 1;212(5):684-93. doi: 10.1093/infdis/jiv065. Epub 2015 Feb 5.
5
Assessing progress in reducing the at-risk population after 13 years of the global programme to eliminate lymphatic filariasis.在全球消除淋巴丝虫病规划实施13年后评估降低高危人群数量方面的进展。
PLoS Negl Trop Dis. 2014 Nov 20;8(11):e3333. doi: 10.1371/journal.pntd.0003333. eCollection 2014 Nov.
6
Spatial analysis of gene regulation reveals new insights into the molecular basis of upper thermal limits.基因调控的空间分析揭示了对高温极限分子基础的新见解。
Mol Ecol. 2014 Dec;23(24):6135-51. doi: 10.1111/mec.13000. Epub 2014 Dec 4.
7
Family of FLP Peptides in Caenorhabditis elegans and Related Nematodes.秀丽隐杆线虫及相关线虫中的FLP肽家族。
Front Endocrinol (Lausanne). 2014 Oct 14;5:150. doi: 10.3389/fendo.2014.00150. eCollection 2014.
8
HTSeq--a Python framework to work with high-throughput sequencing data.HTSeq——一个用于处理高通量测序数据的Python框架。
Bioinformatics. 2015 Jan 15;31(2):166-9. doi: 10.1093/bioinformatics/btu638. Epub 2014 Sep 25.
9
NetworkAnalyst--integrative approaches for protein-protein interaction network analysis and visual exploration.网络分析员--蛋白质-蛋白质相互作用网络分析和可视化探索的综合方法。
Nucleic Acids Res. 2014 Jul;42(Web Server issue):W167-74. doi: 10.1093/nar/gku443. Epub 2014 May 26.
10
Zinc co-ordination by the DHHC cysteine-rich domain of the palmitoyltransferase Swf1.锌通过棕榈酰转移酶 Swf1 的 DHHC 富含半胱氨酸结构域进行配位。
Biochem J. 2013 Sep 15;454(3):427-35. doi: 10.1042/BJ20121693.