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利用定量实时聚合酶链反应评估用于绿色桃蚜(Myzus persicae)表达分析的内参基因。

Evaluation of the reference genes for expression analysis using quantitative real-time polymerase chain reaction in the green peach aphid, Myzus persicae.

作者信息

Kang Zhi-Wei, Liu Fang-Hua, Tian Hong-Gang, Zhang Meng, Guo Shan-Shan, Liu Tong-Xian

机构信息

State Key Laboratory of Crop Stress Biology for the Arid Areas, and Key Laboratory of Northwest Loess Plateau Crop Pest Management of Ministry of Agriculture, Northwest A&F University, Yangling, Shaanxi, China.

出版信息

Insect Sci. 2017 Apr;24(2):222-234. doi: 10.1111/1744-7917.12310. Epub 2016 Apr 13.

Abstract

The green peach aphid, Myzus persicae Sulzer (Hemiptera, Aphididae), is an important cosmopolitan pest. Real time qRT-PCR has been used for target gene expression analysis on M. persicae. Using real time qRT-PCR, the expression levels are normalized on the basis of the reliable reference genes. However, to date, the stability of available reference genes has been insufficient. In this study, we evaluated nine candidate reference genes from M. persicae under diverse experimental conditions. The tested candidate genes were comprehensively ranked based on five alternative methods (RefFinder, geNorm, Normfinder, BestKeeper and the comparative ΔC method). 18s, Actin and ribosomal protein L27 (L27) were recommended as the most stable reference genes for M. persicae, whereas ribosomal protein L27 (L27) was found to be the least stable reference genes for abiotic studies (photoperiod, temperature and insecticide susceptibility). Our finding not only sheds light on establishing an accurate and reliable normalization of real time qRT-PCR data in M. persicae but also lays a solid foundation for further studies of M. persicae involving RNA interference and functional gene research.

摘要

桃蚜(Myzus persicae Sulzer,半翅目,蚜科)是一种重要的世界性害虫。实时定量逆转录聚合酶链反应(qRT-PCR)已用于桃蚜靶基因表达分析。使用实时qRT-PCR时,表达水平基于可靠的内参基因进行标准化。然而,迄今为止,可用内参基因的稳定性还不够。在本研究中,我们在不同实验条件下评估了来自桃蚜的9个候选内参基因。基于五种替代方法(RefFinder、geNorm、Normfinder、BestKeeper和比较ΔC法)对测试的候选基因进行了综合排名。18s、肌动蛋白和核糖体蛋白L27(L27)被推荐为桃蚜最稳定的内参基因,而核糖体蛋白L27(L27)被发现是用于非生物研究(光周期、温度和杀虫剂敏感性)最不稳定的内参基因。我们的研究结果不仅为在桃蚜中建立准确可靠的实时qRT-PCR数据标准化提供了思路,也为进一步开展涉及RNA干扰和功能基因研究的桃蚜研究奠定了坚实基础。

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