Zou Kunliang, Wang Tonghan, Guan Minghui, Liu Yang, Li Jieqin, Liu Yanlong, Du Junli, Wu Degong
College of Agriculture, Anhui Science and Technology University, Chuzhou 233100, China.
Anhui Province International Joint Research Center of Forage Bio-Breeding, Chuzhou 233100, China.
Insects. 2024 Jul 11;15(7):522. doi: 10.3390/insects15070522.
Appropriate reference genes must be selected for accurate qRT-PCR data to conduct a thorough gene expression analysis in the sorghum aphid (, Hemiptera, Aphididae). This approach will establish a foundation for gene expression analysis and determines the efficacy of RNA interference in the sorghum aphid. Nine potential reference genes, including , , , , , , , , and , were assessed under various experimental conditions to gauge their suitability based on qRT-PCR Ct values. The stability of these candidate reference genes in diverse experimental setups was analyzed employing several techniques, including the ΔCt comparative method, geNorm, Normfinder, BestKeeper, and RefFinder. The findings revealed that the quantity of ideal reference genes ascertained by the geNorm method for diverse experimental conditions remained consistent. For the developmental stages of the sorghum aphid, and proved to be the most dependable reference genes, whereas and were recommended as the most stable reference genes for different tissues. In experiments involving wing dimorphism, and were identified as the optimal reference gene pair. Under varying temperatures, and were found to be the most dependable gene pair. For studies focusing on insecticide susceptibility, and emerged as the most stable candidate reference genes. Across all experimental conditions, and was the optimal combination of reference genes in the sorghum aphid. This research has pinpointed stable reference genes that can be utilized across various treatments, thereby enhancing gene expression studies and functional genomics research on the sorghum aphid.
为了在高粱蚜(半翅目,蚜科)中进行全面的基因表达分析,必须选择合适的内参基因以获得准确的qRT-PCR数据。这种方法将为基因表达分析奠定基础,并确定RNA干扰在高粱蚜中的效果。基于qRT-PCR的Ct值,在各种实验条件下评估了九个潜在的内参基因,包括……(此处原文未给出具体基因名称)。采用ΔCt比较法、geNorm、Normfinder、BestKeeper和RefFinder等多种技术,分析了这些候选内参基因在不同实验设置中的稳定性。研究结果表明,通过geNorm方法确定的不同实验条件下理想内参基因的数量保持一致。对于高粱蚜的发育阶段,……(此处原文未给出具体基因名称)被证明是最可靠的内参基因,而……(此处原文未给出具体基因名称)被推荐为不同组织中最稳定的内参基因。在涉及翅二型性的实验中,……(此处原文未给出具体基因名称)被确定为最佳内参基因对。在不同温度下,……(此处原文未给出具体基因名称)被发现是最可靠的基因对。对于关注杀虫剂敏感性的研究,……(此处原文未给出具体基因名称)成为最稳定的候选内参基因。在所有实验条件下,……(此处原文未给出具体基因名称)是高粱蚜中内参基因的最佳组合。这项研究已经确定了可用于各种处理的稳定内参基因,从而加强了对高粱蚜的基因表达研究和功能基因组学研究。