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使用中子反射仪在模型细菌外膜结构-功能研究中产生对比度的氘标记策略。

Deuterium Labeling Strategies for Creating Contrast in Structure-Function Studies of Model Bacterial Outer Membranes Using Neutron Reflectometry.

作者信息

Le Brun Anton P, Clifton Luke A, Holt Stephen A, Holden Peter J, Lakey Jeremy H

机构信息

National Deuteration Facility, Bragg Institute, Australian Nuclear Science and Technology Organization, Lucas Heights, New South Wales, Australia.

ISIS Neutron Facility, STFC Rutherford Appleton Laboratory, Didcot, Oxfordshire, United Kingdom.

出版信息

Methods Enzymol. 2016;566:231-52. doi: 10.1016/bs.mie.2015.05.020. Epub 2015 Jun 18.

Abstract

Studying the outer membrane of Gram-negative bacteria is challenging due to the complex nature of its structure. Therefore, simplified models are required to undertake structure-function studies of processes that occur at the outer membrane/fluid interface. Model membranes can be created by immobilizing bilayers to solid supports such as gold or silicon surfaces, or as monolayers on a liquid support where the surface pressure and fluidity of the lipids can be controlled. Both model systems are amenable to having their structure probed by neutron reflectometry, a technique that provides a one-dimensional depth profile through a membrane detailing its thickness and composition. One of the strengths of neutron scattering is the ability to use contrast matching, allowing molecules containing hydrogen and those enriched with deuterium to be highlighted or matched out against the bulk isotopic composition of the solvent. Lipopolysaccharides, a major component of the outer membrane, can be isolated for incorporation into model membranes. Here, we describe the deuteration of lipopolysaccharides from rough strains of Escherichia coli for incorporation into model outer membranes, and how the use of deuterated materials enhances structural analysis of model membranes by neutron reflectometry.

摘要

由于革兰氏阴性菌外膜结构的复杂性,对其进行研究具有挑战性。因此,需要简化模型来对外膜/流体界面发生的过程进行结构-功能研究。可以通过将双层固定在诸如金或硅表面等固体支持物上,或者在液体支持物上形成单层来创建模型膜,在液体支持物上可以控制脂质的表面压力和流动性。这两种模型系统都适合用中子反射测量法探测其结构,该技术能提供穿过膜的一维深度剖面图,详细说明其厚度和组成。中子散射的优势之一是能够使用对比匹配,使含氢分子和富含氘的分子相对于溶剂的整体同位素组成得以突出显示或匹配掉。脂多糖是外膜的主要成分,可以分离出来并入模型膜中。在此,我们描述了来自大肠杆菌粗糙菌株的脂多糖的氘代,用于并入模型外膜,以及使用氘代材料如何通过中子反射测量法增强对模型膜的结构分析。

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