Mugler Andrew, Levchenko Andre, Nemenman Ilya
Department of Physics, Purdue University, West Lafayette, IN 47907; Department of Physics, Emory University, Atlanta, GA 30322;
Department of Biomedical Engineering and Yale Systems Biology Institute, Yale University, New Haven, CT 06520;
Proc Natl Acad Sci U S A. 2016 Feb 9;113(6):E689-95. doi: 10.1073/pnas.1509597112. Epub 2016 Jan 20.
Gradient sensing requires at least two measurements at different points in space. These measurements must then be communicated to a common location to be compared, which is unavoidably noisy. Although much is known about the limits of measurement precision by cells, the limits placed by the communication are not understood. Motivated by recent experiments, we derive the fundamental limits to the precision of gradient sensing in a multicellular system, accounting for communication and temporal integration. The gradient is estimated by comparing a "local" and a "global" molecular reporter of the external concentration, where the global reporter is exchanged between neighboring cells. Using the fluctuation-dissipation framework, we find, in contrast to the case when communication is ignored, that precision saturates with the number of cells independently of the measurement time duration, because communication establishes a maximum length scale over which sensory information can be reliably conveyed. Surprisingly, we also find that precision is improved if the local reporter is exchanged between cells as well, albeit more slowly than the global reporter. The reason is that whereas exchange of the local reporter weakens the comparison, it decreases the measurement noise. We term such a model "regional excitation-global inhibition." Our results demonstrate that fundamental sensing limits are necessarily sharpened when the need to communicate information is taken into account.
梯度传感需要在空间中的不同点进行至少两次测量。然后必须将这些测量结果传送到一个共同的位置进行比较,而这个过程不可避免地会产生噪声。虽然我们对细胞测量精度的极限已经有了很多了解,但对于通信所带来的极限却并不清楚。受近期实验的启发,我们推导出了多细胞系统中梯度传感精度的基本极限,其中考虑了通信和时间积分。通过比较外部浓度的“局部”和“全局”分子报告器来估计梯度,其中全局报告器在相邻细胞之间交换。使用涨落耗散框架,我们发现,与忽略通信的情况不同,精度会随着细胞数量饱和,而与测量持续时间无关,因为通信建立了一个最大长度尺度,超过这个尺度,感官信息就无法可靠地传递。令人惊讶的是,我们还发现,如果局部报告器也在细胞之间交换,精度会提高,尽管其交换速度比全局报告器慢。原因是,虽然局部报告器的交换会削弱比较,但它会降低测量噪声。我们将这样的模型称为“区域兴奋 - 全局抑制”。我们的结果表明,当考虑到信息通信的需求时,基本传感极限必然会更加严格。