George Cyril X, Ramaswami Gokul, Li Jin Billy, Samuel Charles E
From the Department of Molecular, Cellular and Developmental Biology and.
the Department of Genetics, Stanford University, Stanford, California 94305.
J Biol Chem. 2016 Mar 18;291(12):6158-68. doi: 10.1074/jbc.M115.709014. Epub 2016 Jan 27.
Adenosine deaminases acting on double-stranded RNA (ADARs) catalyze the deamination of adenosine (A) to produce inosine (I) in double-stranded (ds) RNA structures, a process known as A-to-I RNA editing. dsRNA is an important trigger of innate immune responses, including interferon (IFN) production and action. We examined the role of A-to-I RNA editing by two ADARs, ADAR1 and ADAR2, in the sensing of self-RNA in the absence of pathogen infection, leading to activation of IFN-induced, RNA-mediated responses in mouse embryo fibroblasts. IFN treatment of Adar1(-/-) cells lacking both the p110 constitutive and p150 IFN-inducible ADAR1 proteins induced formation of stress granules, whereas neither wild-type (WT) nor Adar2(-/-) cells displayed a comparable stress granule response following IFN treatment. Phosphorylation of protein synthesis initiation factor eIF2α at serine 51 was increased in IFN-treated Adar1(-/-) cells but not in either WT or Adar2(-/-) cells following IFN treatment. Analysis by deep sequencing of mouse exonic loci containing A-to-I-editing sites revealed that the majority of editing in mouse embryo fibroblasts was carried out by ADAR1. IFN treatment increased editing in both WT and Adar2(-/-) cells but not in either Adar1(-/-) or Adar1(-/-) (p150) cells or Stat1(-/-) or Stat2(-/-) cells. Hyper-edited sites found in predicted duplex structures showed strand bias of editing for some RNAs. These results implicate ADAR1 p150 as the major A-to-I editor in mouse embryo fibroblasts, acting as a feedback suppressor of innate immune responses otherwise triggered by self-RNAs possessing regions of double-stranded character.
作用于双链RNA的腺苷脱氨酶(ADARs)催化腺苷(A)脱氨,在双链(ds)RNA结构中产生肌苷(I),这一过程称为A到I RNA编辑。双链RNA是先天性免疫反应的重要触发因素,包括干扰素(IFN)的产生和作用。我们研究了两种ADARs,即ADAR1和ADAR2,在无病原体感染时对自身RNA的感知中A到I RNA编辑的作用,这导致小鼠胚胎成纤维细胞中IFN诱导的RNA介导反应的激活。用IFN处理缺乏组成型p110和IFN诱导型p150 ADAR1蛋白的Adar1(-/-)细胞会诱导应激颗粒的形成,而野生型(WT)细胞和Adar2(-/-)细胞在IFN处理后均未表现出类似的应激颗粒反应。IFN处理后,Adar1(-/-)细胞中蛋白质合成起始因子eIF2α丝氨酸51位点的磷酸化增加,而WT细胞和Adar2(-/-)细胞在IFN处理后均未增加。对含有A到I编辑位点的小鼠外显子位点进行深度测序分析表明,小鼠胚胎成纤维细胞中的大多数编辑是由ADAR1进行的。IFN处理增加了WT细胞和Adar2(-/-)细胞中的编辑,但在Adar1(-/-)或Adar1(-/-)(p150)细胞、Stat1(-/-)或Stat2(-/-)细胞中均未增加。在预测的双链结构中发现的超编辑位点对某些RNA显示出编辑的链偏好性。这些结果表明,ADAR1 p150是小鼠胚胎成纤维细胞中主要的A到I编辑器,作为先天性免疫反应的反馈抑制因子,否则会由具有双链特征区域的自身RNA触发。