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用于斑马鱼高效细菌人工染色体(BAC)转基因的质粒组

A Plasmid Set for Efficient Bacterial Artificial Chromosome (BAC) Transgenesis in Zebrafish.

作者信息

Fuentes Fernando, Reynolds Eric, Lewellis Stephen W, Venkiteswaran Gayatri, Knaut Holger

机构信息

Developmental Genetics Program, Skirball Institute of Biomolecular Medicine, New York University Langone Medical Center, New York 10016.

Developmental Genetics Program, Skirball Institute of Biomolecular Medicine, New York University Langone Medical Center, New York 10016 Kimmel Center for Stem Cell Biology, New York University Langone Medical Center, New York 10016

出版信息

G3 (Bethesda). 2016 Apr 7;6(4):829-34. doi: 10.1534/g3.115.026344.

DOI:10.1534/g3.115.026344
PMID:26818072
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4825653/
Abstract

Transgenesis of large DNA constructs is essential for gene function analysis. Recently, Tol2 transposase-mediated transgenesis has emerged as a powerful tool to insert bacterial artificial chromosome (BAC) DNA constructs into the genome of zebrafish. For efficient transgenesis, the genomic DNA piece in the BAC construct needs to be flanked by Tol2 transposon sites, and the constructs should contain a transgenesis marker for easy identification of transgenic animals. We report a set of plasmids that contain targeting cassettes that allow the insertion of Tol2 sites and different transgenesis markers into BACs. Using BACs containing these targeting cassettes, we show that transgenesis is as efficient as iTol2, that preselecting for expression of the transgenesis marker increases the transgenesis rate, and that BAC transgenics faithfully recapitulate the endogenous gene expression patterns and allow for the estimation of the endogenous gene expression levels.

摘要

大型DNA构建体的转基因对于基因功能分析至关重要。最近,Tol2转座酶介导的转基因已成为将细菌人工染色体(BAC)DNA构建体插入斑马鱼基因组的强大工具。为了实现高效转基因,BAC构建体中的基因组DNA片段需要侧翼有Tol2转座子位点,并且构建体应包含一个转基因标记,以便于识别转基因动物。我们报告了一组质粒,其包含靶向盒,可将Tol2位点和不同的转基因标记插入BAC中。使用含有这些靶向盒的BAC,我们表明转基因效率与iTol2相同,预先选择转基因标记的表达可提高转基因率,并且BAC转基因忠实地重现内源性基因表达模式,并允许估计内源性基因表达水平。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec93/4825653/2938f3c1e797/829f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec93/4825653/65c28d54b768/829f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec93/4825653/2f4ae94170c1/829f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec93/4825653/2938f3c1e797/829f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec93/4825653/65c28d54b768/829f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec93/4825653/2f4ae94170c1/829f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ec93/4825653/2938f3c1e797/829f3.jpg

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Nat Biotechnol. 2015 Dec;33(12):1272-1279. doi: 10.1038/nbt.3372. Epub 2015 Nov 16.
2
Generation and dynamics of an endogenous, self-generated signaling gradient across a migrating tissue.内源性、自我产生的信号梯度在迁移组织中的产生和动态变化。
Cell. 2013 Oct 24;155(3):674-87. doi: 10.1016/j.cell.2013.09.046. Epub 2013 Oct 10.
3
Site-directed zebrafish transgenesis into single landing sites with the phiC31 integrase system.
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bioRxiv. 2023 Oct 5:2023.10.03.560679. doi: 10.1101/2023.10.03.560679.
4
A robust knock-in approach using a minimal promoter and a minicircle.一种使用最小启动子和微型环的强大敲入方法。
Dev Biol. 2024 Jan;505:24-33. doi: 10.1016/j.ydbio.2023.10.002. Epub 2023 Oct 14.
5
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