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通过对海象、北海狮和贝加尔湖海豹这三种鳍足类动物(鳍脚目,食肉目)进行比较染色体描绘证实的原始食肉动物核型

The Ancestral Carnivore Karyotype As Substantiated by Comparative Chromosome Painting of Three Pinnipeds, the Walrus, the Steller Sea Lion and the Baikal Seal (Pinnipedia, Carnivora).

作者信息

Beklemisheva Violetta R, Perelman Polina L, Lemskaya Natalya A, Kulemzina Anastasia I, Proskuryakova Anastasia A, Burkanov Vladimir N, Graphodatsky Alexander S

机构信息

Department of Comparative Genomics, Institute of Molecular and Cellular Biology, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia.

Novosibirsk State University, Novosibirsk, Russia.

出版信息

PLoS One. 2016 Jan 28;11(1):e0147647. doi: 10.1371/journal.pone.0147647. eCollection 2016.

Abstract

Karyotype evolution in Carnivora is thoroughly studied by classical and molecular cytogenetics and supplemented by reconstructions of Ancestral Carnivora Karyotype (ACK). However chromosome painting information from two pinniped families (Odobenidae and Otariidae) is noticeably missing. We report on the construction of the comparative chromosome map for species from each of the three pinniped families: the walrus (Odobenus rosmarus, Odobenidae-monotypic family), near threatened Steller sea lion (Eumetopias jubatus, Otariidae) and the endemic Baikal seal (Pusa sibirica, Phocidae) using combination of human, domestic dog and stone marten whole-chromosome painting probes. The earliest karyological studies of Pinnipedia showed that pinnipeds were characterized by a pronounced karyological conservatism that is confirmed here with species from Phocidae, Otariidae and Odobenidae sharing same low number of conserved human autosomal segments (32). Chromosome painting in Pinnipedia and comparison with non-pinniped carnivore karyotypes provide strong support for refined structure of ACK with 2n = 38. Constructed comparative chromosome maps show that pinniped karyotype evolution was characterized by few tandem fusions, seemingly absent inversions and slow rate of genome rearrangements (less then one rearrangement per 10 million years). Integrative comparative analyses with published chromosome painting of Phoca vitulina revealed common cytogenetic signature for Phoca/Pusa branch and supports Phocidae and Otaroidea (Otariidae/Odobenidae) as sister groups. We revealed rearrangements specific for walrus karyotype and found the chromosomal signature linking together families Otariidae and Odobenidae. The Steller sea lion karyotype is the most conserved among three studied species and differs from the ACK by single fusion. The study underlined the strikingly slow karyotype evolution of the Pinnipedia in general and the Otariidae in particular.

摘要

通过经典和分子细胞遗传学对食肉目动物的核型进化进行了深入研究,并通过重建祖先食肉目核型(ACK)加以补充。然而,来自两个鳍足类家族(海象科和海狮科)的染色体涂染信息明显缺失。我们报告了使用人类、家犬和石貂的全染色体涂染探针,构建三个鳍足类家族中每个家族物种的比较染色体图谱:海象(海象属,海象科单型科)、近危的北海狗(北海狮属,海狮科)和特有物种贝加尔湖海豹(海豹属,海豹科)。鳍足类动物最早的核型研究表明,鳍足类动物具有明显的核型保守性,这里通过海豹科、海狮科和海象科的物种共享相同数量较少的保守人类常染色体片段(32条)得到了证实。鳍足类动物的染色体涂染以及与非鳍足类食肉动物核型的比较,为2n = 38的ACK精细结构提供了有力支持。构建的比较染色体图谱表明,鳍足类动物的核型进化特征是串联融合较少、似乎没有倒位以及基因组重排速率较慢(每1000万年少于一次重排)。与已发表的港海豹染色体涂染的综合比较分析揭示了海豹属/环斑海豹属分支的共同细胞遗传学特征,并支持海豹科和海狮总科(海狮科/海象科)为姐妹群。我们揭示了海象核型特有的重排,并发现了将海狮科和海象科联系在一起的染色体特征。北海狗的核型在三个研究物种中是最保守的,与ACK的区别仅在于一次融合。该研究强调了鳍足类动物总体上,特别是海狮科核型进化极其缓慢。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c202/4731086/39481a4b6d1e/pone.0147647.g001.jpg

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