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[全基因组研究结果显示俄罗斯人群中基因MUC19多态性变异与哮喘的关联]

[Association of Polymorphic Variants of Gene MUC19 with Asthma in Russians According to the Results of a Genome-Wide Study].

作者信息

Karunas A S, Yunusbaev B B, Fedorova Yu Yu, Gimalova G F, Khusnutdinova E K

出版信息

Genetika. 2015 Nov;51(11):1315-24.

Abstract

Asthma is a heterogeneous multifactorial disease that is characterized in most cases by chronic respiratory tract inflammation. We carried out a GWAS in order to identify susceptibility genes for asthma in individuals of different ethnic backgrounds. The study sample consisted of 358 unrelated patients with asthma (160 Russians, 125 Tatars, and 73 Bashkirs) and 369 individuals of a control group (152 Russians, 117 Tatars, and 100 Bashkirs). DNA samples were genotyped with an Illumina human610 quad array (Illumina) as part of the project GABRIEL. Replication of the results of genome-wide analysis was carried out on an additional independent sample of 310 asthma patients (132 Russians, 105 Tatars, and 73 Bashkirs) and 310 individuals in a control group (131 Russians, 106 Tatars, and Bashkirs 77). Genome-wide analysis showed an association of asthma in Russians with the polymorphic loci of gene MUC19 (12q12) encoding gel-forming mucin 19. The highest level of association with asthma was found in rs2933346, which is located in intron 52 of this gene (p = 2.59 x 10(-6)). Seven polymorphic loci of gene MUC19 (rs1492313, rs2588401, rs2588402, rs2638863, rs2638864, rs1352940, and rs2933373), which are in close linkage disequilibrium among themselves and rs2933346, are associated with asthma with the same p-value (p = 4.96 x 10(-6)). The replicative study of rs1492313 in the independent sample of individuals confirmed the presence of the association of the polymorphic loci of this gene with the development of asthma in Russians. According to our data, the association of polymorphic variants of gene MUC19 with asthma has not been previously identified in any study. Our results indicate the important role of polymorphic variants of gene MUC19 in the formation of a predisposition to the development of asthma in individuals of Russian ethnicity.

摘要

哮喘是一种异质性多因素疾病,在大多数情况下其特征为慢性呼吸道炎症。我们开展了一项全基因组关联研究(GWAS),以确定不同种族背景个体中哮喘的易感基因。研究样本包括358名无亲缘关系的哮喘患者(160名俄罗斯人、125名鞑靼人、73名巴什基尔人)和369名对照组个体(152名俄罗斯人、117名鞑靼人、100名巴什基尔人)。作为GABRIEL项目的一部分,使用Illumina human610 quad芯片(Illumina公司)对DNA样本进行基因分型。在另外一个独立样本中对全基因组分析结果进行了验证,该样本包括310名哮喘患者(132名俄罗斯人、105名鞑靼人、73名巴什基尔人)和310名对照组个体(131名俄罗斯人、106名鞑靼人、77名巴什基尔人)。全基因组分析显示,俄罗斯人中哮喘与编码凝胶形成粘蛋白19的基因MUC19(12q12)的多态性位点相关。在该基因第52内含子中的rs2933346与哮喘的关联程度最高(p = 2.59 x 10(-6))。基因MUC19的7个多态性位点(rs1492313、rs2588401、rs2588402、rs2638863、rs2638864、rs1352940和rs2933373)彼此之间以及与rs2933346处于紧密连锁不平衡状态,与哮喘的关联p值相同(p = 4.96 x 10(-6))。在独立个体样本中对rs1492313进行的验证研究证实了该基因的多态性位点与俄罗斯人哮喘发病之间存在关联。根据我们的数据,此前在任何研究中均未发现基因MUC19的多态性变体与哮喘有关联。我们的结果表明,基因MUC19的多态性变体在俄罗斯族个体哮喘易感性形成中起重要作用。

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