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快速生成有效的人工小RNA以增强植物的抗病毒防御能力。

Fast-forward generation of effective artificial small RNAs for enhanced antiviral defense in plants.

作者信息

Carbonell Alberto, Carrington James C, Daròs José-Antonio

机构信息

Instituto de Biología Molecular y Celular de Plantas (Consejo Superior de Investigaciones Científicas-Universidad Politécnica de Valencia), Valencia, 46022 Spain.

Donald Danforth Plant Science Center, St. Louis, 63132 USA.

出版信息

RNA Dis. 2016;3(1). Epub 2016 Jan 12.

Abstract

Artificial small RNAs (sRNAs) are short ≈21-nt non-coding RNAs engineered to inactivate sequence complementary RNAs. In plants, they have been extensively used to silence cellular transcripts in gene function analyses and to target invading RNA viruses to induce resistance. Current artificial sRNA-based antiviral resistance in plants is mainly limited to a single virus, and is jeopardized by the emergence of mutations in the artificial sRNA target site or by the presence of co-infecting viruses. Hence, there is a need to further develop the artificial sRNA approach to generate more broad and durable antiviral resistance in plants. A recently developed toolbox allows for the time and cost-effective large-scale production of artificial sRNA constructs in plants. The toolbox includes the P-SAMS web tool for the automated design of artificial sRNAs, and a new generation of artificial microRNA and synthetic -acting small interfering RNA (syn-tasiRNA) vectors for direct cloning and high expression of artificial sRNAs. Here we describe how the simplicity and high-throughput capability of these new technologies should accelerate the study of artificial sRNA-based antiviral resistance in plants. In particular, we discuss the potential of the syn-tasiRNA approach as a promising strategy for developing more effective, durable and broad antiviral resistance in plants.

摘要

人工小RNA(sRNAs)是经设计用来使序列互补RNA失活的约21个核苷酸的短非编码RNA。在植物中,它们已被广泛用于基因功能分析中使细胞转录本沉默,并靶向入侵的RNA病毒以诱导抗性。目前基于人工sRNA的植物抗病毒抗性主要局限于单一病毒,并且会因人工sRNA靶位点突变的出现或共感染病毒的存在而受到威胁。因此,需要进一步开发人工sRNA方法,以在植物中产生更广泛、更持久的抗病毒抗性。最近开发的一个工具箱能够在植物中经济高效地大规模生产人工sRNA构建体。该工具箱包括用于人工sRNA自动化设计的P-SAMS网络工具,以及用于直接克隆和高效表达人工sRNA的新一代人工微小RNA和合成作用小干扰RNA(syn-tasiRNA)载体。在此我们描述了这些新技术的简便性和高通量能力应如何加速基于人工sRNA的植物抗病毒抗性研究。特别是,我们讨论了syn-tasiRNA方法作为在植物中开发更有效、持久和广泛抗病毒抗性的一种有前景策略的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/195f/4768481/75df8cad4eac/nihms-751558-f0001.jpg

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Nat Rev Mol Cell Biol. 2015 Dec;16(12):727-41. doi: 10.1038/nrm4085. Epub 2015 Nov 4.

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