Flanagan Kelly A, Comber Joseph D, Mearls Elizabeth, Fenton Colleen, Wang Erickson Anna F, Camp Amy H
Department of Biological Sciences, Mount Holyoke College, South Hadley, Massachusetts, USA.
Department of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania, USA.
J Bacteriol. 2016 Apr 14;198(9):1451-63. doi: 10.1128/JB.00958-15. Print 2016 May.
SpoIIQ is an essential component of a channel connecting the developing forespore to the adjacent mother cell during Bacillus subtilis sporulation. This channel is generally required for late gene expression in the forespore, including that directed by the late-acting sigma factor σ(G) Here, we present evidence that SpoIIQ also participates in a previously unknown gene regulatory circuit that specifically represses expression of the gene encoding the anti-sigma factor CsfB, a potent inhibitor of σ(G) The csfB gene is ordinarily transcribed in the forespore only by the early-acting sigma factor σ(F) However, in a mutant lacking the highly conserved SpoIIQ transmembrane amino acid Tyr-28, csfB was also aberrantly transcribed later by σ(G), the very target of CsfB inhibition. This regulation of csfB by SpoIIQ Tyr-28 is specific, given that the expression of other σ(F)-dependent genes was unaffected. Moreover, we identified a conserved element within the csfB promoter region that is both necessary and sufficient for SpoIIQ Tyr-28-mediated inhibition. These results indicate that SpoIIQ is a bifunctional protein that not only generally promotes σ(G)activity in the forespore as a channel component but also specifically maximizes σ(G)activity as part of a gene regulatory circuit that represses σ(G)-dependent expression of its own inhibitor, CsfB. Finally, we demonstrate that SpoIIQ Tyr-28 is required for the proper localization and stability of the SpoIIE phosphatase, raising the possibility that these two multifunctional proteins cooperate to fine-tune developmental gene expression in the forespore at late times.
Cellular development is orchestrated by gene regulatory networks that activate or repress developmental genes at the right time and place. Late gene expression in the developing Bacillus subtilis spore is directed by the alternative sigma factor σ(G) The activity of σ(G)requires a channel apparatus through which the adjacent mother cell provides substrates that generally support gene expression. Here we report that the channel protein SpoIIQ also specifically maximizes σ(G)activity as part of a previously unknown regulatory circuit that prevents σ(G)from activating transcription of the gene encoding its own inhibitor, the anti-sigma factor CsfB. The discovery of this regulatory circuit significantly expands our understanding of the gene regulatory network controlling late gene expression in the developing B. subtilis spore.
SpoIIQ是枯草芽孢杆菌芽孢形成过程中连接发育中的前芽孢与相邻母细胞的通道的重要组成部分。该通道通常是前芽孢中晚期基因表达所必需的,包括由晚期作用的σ因子σ(G)指导的基因表达。在此,我们提供证据表明,SpoIIQ还参与了一个先前未知的基因调控回路,该回路特异性地抑制编码抗σ因子CsfB(σ(G)的有效抑制剂)的基因的表达。csfB基因通常仅在前芽孢中由早期作用的σ因子σ(F)转录。然而,在缺乏高度保守的SpoIIQ跨膜氨基酸Tyr-28的突变体中,csfB也会在后期被σ(G)异常转录,而σ(G)正是CsfB抑制的靶点。鉴于其他σ(F)依赖性基因的表达未受影响,SpoIIQ Tyr-28对csfB的这种调控具有特异性。此外,我们在csfB启动子区域鉴定出一个保守元件,它对于SpoIIQ Tyr-28介导的抑制作用既必要又充分。这些结果表明,SpoIIQ是一种双功能蛋白,它不仅作为通道组件一般地促进前芽孢中的σ(G)活性,而且作为基因调控回路的一部分特异性地最大化σ(G)活性,该回路抑制其自身抑制剂CsfB的σ(G)依赖性表达。最后,我们证明SpoIIQ Tyr-28是SpoIIE磷酸酶正确定位和稳定性所必需的,这增加了这两种多功能蛋白在后期协同微调前芽孢中发育基因表达的可能性。
细胞发育由基因调控网络精心编排,这些网络在正确的时间和地点激活或抑制发育基因。发育中的枯草芽孢杆菌孢子中的晚期基因表达由替代σ因子σ(G)指导。σ(G)的活性需要一个通道装置,相邻的母细胞通过该装置提供通常支持基因表达的底物。在此我们报告,通道蛋白SpoIIQ还作为一个先前未知的调控回路的一部分特异性地最大化σ(G)活性,该回路可防止σ(G)激活编码其自身抑制剂抗σ因子CsfB的基因的转录。这一调控回路的发现显著扩展了我们对控制发育中的枯草芽孢杆菌孢子中晚期基因表达的基因调控网络的理解。