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用于解读环境对农作物影响的环境分型

Envirotyping for deciphering environmental impacts on crop plants.

作者信息

Xu Yunbi

机构信息

Institute of Crop Science, Chinese Academy of Agricultural Sciences, 100081, Beijing, China.

International Maize and Wheat Improvement Center (CIMMYT), El Batan, Texcoco, CP 56130, Mexico.

出版信息

Theor Appl Genet. 2016 Apr;129(4):653-673. doi: 10.1007/s00122-016-2691-5. Epub 2016 Mar 1.

Abstract

Global climate change imposes increasing impacts on our environments and crop production. To decipher environmental impacts on crop plants, the concept "envirotyping" is proposed, as a third "typing" technology, complementing with genotyping and phenotyping. Environmental factors can be collected through multiple environmental trials, geographic and soil information systems, measurement of soil and canopy properties, and evaluation of companion organisms. Envirotyping contributes to crop modeling and phenotype prediction through its functional components, including genotype-by-environment interaction (GEI), genes responsive to environmental signals, biotic and abiotic stresses, and integrative phenotyping. Envirotyping, driven by information and support systems, has a wide range of applications, including environmental characterization, GEI analysis, phenotype prediction, near-iso-environment construction, agronomic genomics, precision agriculture and breeding, and development of a four-dimensional profile of crop science involving genotype (G), phenotype (P), envirotype (E) and time (T) (developmental stage). In the future, envirotyping needs to zoom into specific experimental plots and individual plants, along with the development of high-throughput and precision envirotyping platforms, to integrate genotypic, phenotypic and envirotypic information for establishing a high-efficient precision breeding and sustainable crop production system based on deciphered environmental impacts.

摘要

全球气候变化对我们的环境和作物生产造成了越来越大的影响。为了破译环境对作物的影响,人们提出了“环境分型”这一概念,作为第三种“分型”技术,与基因分型和表型分型相辅相成。环境因素可以通过多种环境试验、地理和土壤信息系统、土壤和冠层特性测量以及伴生生物评估来收集。环境分型通过其功能组件,包括基因型与环境互作(GEI)、对环境信号作出反应的基因、生物和非生物胁迫以及综合表型分型,为作物建模和表型预测做出贡献。在信息和支持系统的推动下,环境分型具有广泛的应用,包括环境表征、GEI分析、表型预测、近等环境构建、农艺基因组学、精准农业与育种,以及构建涉及基因型(G)、表型(P)、环境型(E)和时间(T)(发育阶段)的作物科学四维图谱。未来,随着高通量和精准环境分型平台的发展,环境分型需要深入到特定的试验小区和单株植物,整合基因型、表型和环境型信息,以建立一个基于破译环境影响的高效精准育种和可持续作物生产系统。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/999e/4799247/6cef08fddf8f/122_2016_2691_Fig1_HTML.jpg

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