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琼脂平板上铁载体的数字图像定量分析。

Digital image quantification of siderophores on agar plates.

作者信息

Andrews Megan Y, Santelli Cara M, Duckworth Owen W

机构信息

Department of Soil Science, North Carolina State University, Raleigh, NC 27695-7619, USA.

University of Minnesota, Department of Earth Sciences, Minneapolis, MN 55455-0231, USA.

出版信息

Data Brief. 2016 Feb 3;6:890-8. doi: 10.1016/j.dib.2016.01.054. eCollection 2016 Mar.

DOI:10.1016/j.dib.2016.01.054
PMID:26937467
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4752732/
Abstract

This article presents visual image data and detailed methodology for the use of a new method for quantifying the exudation of siderophores during fungal growth. The data include images showing time series for calibration, fungal exudation, and negative controls, as well as replication accuracy information. In addition, we provide detailed protocols for making CAS assay layer plates, the digital analysis protocol for determining area of color change, and discuss growth media that do and do not work with the layer plate method. The results of these data, their interpretation, and further discussion can be found in Andrews et al., 2016 [1].

摘要

本文展示了视觉图像数据以及使用一种新方法量化真菌生长过程中铁载体渗出量的详细方法。数据包括用于校准、真菌渗出和阴性对照的时间序列图像,以及复制准确性信息。此外,我们提供了制作CAS测定层板的详细方案、用于确定颜色变化区域的数字分析方案,并讨论了适用于和不适用于层板法的生长培养基。这些数据的结果、解释及进一步讨论可在Andrews等人2016年的文献[1]中找到。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/5f7222607533/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/8e6d8d9c8f7a/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/64ef6dbd8781/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/6d505776ab60/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/25653e03fe9a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/68a302299f61/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/b6a263feafa5/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/5f7222607533/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/8e6d8d9c8f7a/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/64ef6dbd8781/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/6d505776ab60/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/25653e03fe9a/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/68a302299f61/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/b6a263feafa5/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fa9e/4752732/5f7222607533/gr7.jpg

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本文引用的文献

1
Layer plate CAS assay for the quantitation of siderophore production and determination of exudation patterns for fungi.用于定量测定铁载体产生及确定真菌渗出模式的层板CAS分析法
J Microbiol Methods. 2016 Feb;121:41-3. doi: 10.1016/j.mimet.2015.12.012. Epub 2015 Dec 19.
2
Promotion of Mn(II) oxidation and remediation of coal mine drainage in passive treatment systems by diverse fungal and bacterial communities.通过多种真菌和细菌群落促进被动处理系统中 Mn(II) 的氧化和煤矿排水的修复。
Appl Environ Microbiol. 2010 Jul;76(14):4871-5. doi: 10.1128/AEM.03029-09. Epub 2010 May 21.
3
Universal chemical assay for the detection and determination of siderophores.
Insights into the Endophytic Bacterial Microbiome of Crocus sativus: Functional Characterization Leads to Potential Agents that Enhance the Plant Growth, Productivity, and Key Metabolite Content.藏红花内生细菌微生物组的见解:功能表征带来增强植物生长、生产力和关键代谢物含量的潜在因子。
Microb Ecol. 2022 Apr;83(3):669-688. doi: 10.1007/s00248-021-01810-y. Epub 2021 Jul 9.
4
Multifunction as an Endophyte: Growth Promotion and Biologic Control of , (Westwood) (Hemiptera: Aleyrodidae) in Tomato.作为内生菌的多功能性:对番茄上烟粉虱(韦斯特伍德)(半翅目:粉虱科)的生长促进和生物防治
Insects. 2020 Sep 2;11(9):591. doi: 10.3390/insects11090591.
用于检测和测定铁载体的通用化学分析方法。
Anal Biochem. 1987 Jan;160(1):47-56. doi: 10.1016/0003-2697(87)90612-9.