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边缘生存:在群体运动过程中,保护假单胞菌自发产生 gac 突变。

Living on the edge: emergence of spontaneous gac mutations in Pseudomonas protegens during swarming motility.

机构信息

Department of Microbial Ecology, Netherlands Institute of Ecology, Droevendaalsesteeg 10, 6708, PB, Wageningen, The Netherlands.

Laboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, 6708, PB, Wageningen, The Netherlands.

出版信息

Environ Microbiol. 2016 Oct;18(10):3453-3465. doi: 10.1111/1462-2920.13288. Epub 2016 Apr 28.

Abstract

Swarming motility is a flagella-driven multicellular behaviour that allows bacteria to colonize new niches and escape competition. Here, we investigated the evolution of specific mutations in the GacS/GacA two-component regulatory system in swarming colonies of Pseudomonas protegens Pf-5. Experimental evolution assays showed that repeated rounds of swarming by wildtype Pf-5 drives the accumulation of gacS/gacA spontaneous mutants on the swarming edge. These mutants cannot swarm on their own because they lack production of the biosurfactant orfamide A, but they do co-swarm with orfamide-producing wildtype Pf-5. These co-swarming assays further demonstrated that ΔgacA mutant cells indeed predominate on the edge and that initial ΔgacA:wildtype Pf-5 ratios of at least 2:1 lead to a collapse of the swarming colony. Subsequent whole-genome transcriptome analyses revealed that genes associated with motility, resource acquisition, chemotaxis and efflux were significantly upregulated in ΔgacA mutant on swarming medium. Moreover, transmission electron microscopy showed that ΔgacA mutant cells were longer and more flagellated than wildtype cells, which may explain their predominance on the swarming edge. We postulate that adaptive evolution through point mutations is a common feature of range-expanding microbial populations and that the putative fitness benefits of these mutations during dispersal of bacteria into new territories are frequency-dependent.

摘要

群体运动性是一种由鞭毛驱动的多细胞行为,使细菌能够定植新的小生境并逃避竞争。在这里,我们研究了群体运动性的假单胞菌 Pf-5 中 GacS/GacA 双组分调节系统中特定突变的进化。实验进化实验表明,野生型 Pf-5 的反复群体运动导致 GacS/GacA 自发突变体在群体运动边缘的积累。这些突变体自身不能群体运动,因为它们缺乏生物表面活性剂 Orfamide A 的产生,但它们确实与产生 Orfamide 的野生型 Pf-5 共同群体运动。这些共同群体运动实验进一步表明,ΔgacA 突变体细胞确实在边缘占主导地位,并且至少 2:1 的初始ΔgacA:野生型 Pf-5 比例会导致群体运动菌落的崩溃。随后的全基因组转录组分析表明,与运动性、资源获取、趋化性和外排相关的基因在群体运动培养基中的ΔgacA 突变体中显著上调。此外,透射电子显微镜显示,ΔgacA 突变体细胞比野生型细胞更长且鞭毛更多,这可能解释了它们在群体运动边缘的优势。我们假设,通过点突变的适应性进化是范围扩展微生物种群的共同特征,并且这些突变在细菌向新领地扩散过程中分散的潜在适应性优势是频率依赖性的。

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