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一种综合方法,用于研究单核苷酸变异和拷贝数变异在注意力缺陷多动障碍中的各自作用。

An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in Attention-Deficit/Hyperactivity Disorder.

作者信息

Lima Leandro de Araújo, Feio-dos-Santos Ana Cecília, Belangero Sintia Iole, Gadelha Ary, Bressan Rodrigo Affonseca, Salum Giovanni Abrahão, Pan Pedro Mario, Moriyama Tais Silveira, Graeff-Martins Ana Soledade, Tamanaha Ana Carina, Alvarenga Pedro, Krieger Fernanda Valle, Fleitlich-Bilyk Bacy, Jackowski Andrea Parolin, Brietzke Elisa, Sato João Ricardo, Polanczyk Guilherme Vanoni, Mari Jair de Jesus, Manfro Gisele Gus, do Rosário Maria Conceição, Miguel Eurípedes Constantino, Puga Renato David, Tahira Ana Carolina, Souza Viviane Neri, Chile Thais, Gouveia Gisele Rodrigues, Simões Sérgio Nery, Chang Xiao, Pellegrino Renata, Tian Lifeng, Glessner Joseph T, Hashimoto Ronaldo Fumio, Rohde Luis Augusto, Sleiman Patrick M A, Hakonarson Hakon, Brentani Helena

机构信息

Inter-institutional Grad Program on Bioinformatics, University of São Paulo, São Paulo, SP, Brazil.

Center for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.

出版信息

Sci Rep. 2016 Mar 7;6:22851. doi: 10.1038/srep22851.

Abstract

Many studies have attempted to investigate the genetic susceptibility of Attention-Deficit/Hyperactivity Disorder (ADHD), but without much success. The present study aimed to analyze both single-nucleotide and copy-number variants contributing to the genetic architecture of ADHD. We generated exome data from 30 Brazilian trios with sporadic ADHD. We also analyzed a Brazilian sample of 503 children/adolescent controls from a High Risk Cohort Study for the Development of Childhood Psychiatric Disorders, and also previously published results of five CNV studies and one GWAS meta-analysis of ADHD involving children/adolescents. The results from the Brazilian trios showed that cases with de novo SNVs tend not to have de novo CNVs and vice-versa. Although the sample size is small, we could also see that various comorbidities are more frequent in cases with only inherited variants. Moreover, using only genes expressed in brain, we constructed two "in silico" protein-protein interaction networks, one with genes from any analysis, and other with genes with hits in two analyses. Topological and functional analyses of genes in this network uncovered genes related to synapse, cell adhesion, glutamatergic and serotoninergic pathways, both confirming findings of previous studies and capturing new genes and genetic variants in these pathways.

摘要

许多研究试图探究注意力缺陷多动障碍(ADHD)的遗传易感性,但成效不大。本研究旨在分析单核苷酸变异和拷贝数变异对ADHD遗传结构的影响。我们从30个患有散发性ADHD的巴西三联体中生成了外显子数据。我们还分析了来自儿童精神疾病发展高危队列研究的503名巴西儿童/青少年对照样本,以及之前发表的五项关于ADHD的拷贝数变异研究结果和一项涉及儿童/青少年的ADHD全基因组关联研究荟萃分析结果。来自巴西三联体的结果表明,新发单核苷酸变异的病例往往没有新发拷贝数变异,反之亦然。尽管样本量较小,但我们也可以看到,仅具有遗传变异的病例中各种共病更为常见。此外,仅使用在大脑中表达的基因,我们构建了两个“虚拟”蛋白质-蛋白质相互作用网络,一个包含来自任何分析的基因,另一个包含在两项分析中有命中结果的基因。对该网络中的基因进行拓扑和功能分析,发现了与突触、细胞粘附、谷氨酸能和5-羟色胺能途径相关的基因,既证实了先前研究的结果,又发现了这些途径中的新基因和遗传变异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d52c/4780010/1bb5a3dc8466/srep22851-f1.jpg

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