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从使用猪粪的厌氧消化池中分离并鉴定一种新的甲酸甲烷杆菌KOR-1

Isolation and Characterization of a New Methanobacterium formicicum KOR-1 from an Anaerobic Digester Using Pig Slurry.

作者信息

Battumur Urantulkhuur, Yoon Young-Man, Kim Chang-Hyun

机构信息

Biogas Research Center, Hankyong National University, Anseong 456-749, Korea.

Biogas Research Center, Hankyong National University, Anseong 456-749, Korea ; Department of Animal Life and Environment Science, Hankyong National University, Anseong 456-749, Korea.

出版信息

Asian-Australas J Anim Sci. 2016 Apr;29(4):586-93. doi: 10.5713/ajas.15.0507. Epub 2016 Apr 1.

Abstract

A new methanogen was isolated from an anaerobic digester using pig slurry in South Korea. Only one strain, designated KOR-1, was characterized in detail. Cells of KOR-1 were straight or crooked rods, non-motile, 5 to 15 μm long and 0.7 μm wide. They stained Gram-positive and produced methane from H2+CO2 and formate. Strain KOR-1 grew optimally at 38°C. The optimum pH for growth was 7.0. The strain grew at 0.5% to 3.0% NaCl, with optimum growth at 2.5% NaCl. The G+C content of genomic DNA of strain KOR-1 was 41 mol%. The strain tolerated ampicillin, penicillin G, kanamycin and streptomycin but tetracycline inhibited cell growth. A large fragment of the 16S rRNA gene (~1,350 bp) was obtained from the isolate and sequenced. Comparison of 16S rRNA genes revealed that strain KOR-1 is related to Methanobacterium formicicum (98%, sequence similarity), Methanobacterium bryantii (95%) and Methanobacterium ivanovii (93%). Phylogenetic analysis of the deduced mcrA gene sequences confirmed the closest relative as based on mcrA gene sequence analysis was Methanobacterium formicicum strain (97% nucleic acid sequence identity). On the basis of physiological and phylogenetic characteristics, strain KOR-1 is proposed as a new strain within the genus Methanobacterium, Methanobacterium formicicum KOR-1.

摘要

从韩国一个使用猪粪的厌氧消化池中分离出一种新的产甲烷菌。仅对一株命名为KOR - 1的菌株进行了详细表征。KOR - 1的细胞呈直杆状或弯杆状,无运动性,长5至15μm,宽0.7μm。它们革兰氏染色呈阳性,可利用H₂ + CO₂和甲酸盐产生甲烷。菌株KOR - 1在38°C时生长最佳。生长的最适pH为7.0。该菌株在0.5%至3.0%的NaCl浓度下生长,在2.5% NaCl浓度下生长最佳。菌株KOR - 1基因组DNA的G + C含量为41 mol%。该菌株耐受氨苄青霉素、青霉素G、卡那霉素和链霉素,但四环素抑制细胞生长。从该分离物中获得了16S rRNA基因的一个大片段(约1350 bp)并进行了测序。16S rRNA基因比较显示,菌株KOR - 1与甲酸甲烷杆菌(98%,序列相似性)、布氏甲烷杆菌(95%)和伊氏甲烷杆菌(93%)相关。基于推导的mcrA基因序列的系统发育分析证实,基于mcrA基因序列分析,其最接近的亲缘种是甲酸甲烷杆菌菌株(核酸序列同一性为97%)。基于生理和系统发育特征,菌株KOR - 1被提议作为甲烷杆菌属内的一个新菌株,即甲酸甲烷杆菌KOR - 1。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/51b6/4782095/063f3f702fa3/ajas-29-4-586f1.jpg

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