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来自伊拉克北部的三株新型梭菌分离株的基因组序列草图

Draft Genome Sequences of Three Novel Clostridium Isolates from Northern Iraq.

作者信息

Rashid Srwa R J, Clokie Martha R J, Millard Andrew D

机构信息

Department of Infection, Immunity and Inflammation, University of Leicester, Leicester, Leicestershire, United Kingdom.

Microbiology and Infection Unit, Warwick Medical School, University of Warwick, Warwick, United Kingdom

出版信息

Genome Announc. 2016 Feb 25;4(1):e00033-16. doi: 10.1128/genomeA.00033-16.

DOI:10.1128/genomeA.00033-16
PMID:26950326
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4767916/
Abstract

Three Clostridium sp. strains were isolated from soil and sediment collected from the Kurdistan region of Iraq. All three isolates were found to harbor putative prophages, with a CRISPR-Cas system found in strains C105KSO13 and C105KSO14.

摘要

从伊拉克库尔德斯坦地区采集的土壤和沉积物中分离出三株梭菌属菌株。发现所有三株分离株都含有假定的前噬菌体，在菌株C105KSO13和C105KSO14中发现了CRISPR-Cas系统。

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本文引用的文献

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Prokka: rapid prokaryotic genome annotation.Prokka：快速的原核生物基因组注释。
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
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Isolation and characterization of a novel Staphylococcus aureus bacteriophage, phiMR25, and its therapeutic potential.一株新型金黄色葡萄球菌噬菌体 phiMR25 的分离与鉴定及其治疗潜力。
Arch Virol. 2010 Apr;155(4):545-52. doi: 10.1007/s00705-010-0623-2. Epub 2010 Mar 12.
7
PILER-CR: fast and accurate identification of CRISPR repeats.PILER-CR：快速准确地识别CRISPR重复序列。
BMC Bioinformatics. 2007 Jan 20;8:18. doi: 10.1186/1471-2105-8-18.
8
The complete genomes and proteomes of 27 Staphylococcus aureus bacteriophages.27种金黄色葡萄球菌噬菌体的完整基因组和蛋白质组。
Proc Natl Acad Sci U S A. 2005 Apr 5;102(14):5174-9. doi: 10.1073/pnas.0501140102. Epub 2005 Mar 23.