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光遗传学工具的自然资源。

Natural Resources for Optogenetic Tools.

作者信息

Mathes Tilo

机构信息

Department of Exact Sciences/Biophysics, Vrije Universiteit, De Boelelaan 1081A, 1081 HV, Amsterdam, The Netherlands.

出版信息

Methods Mol Biol. 2016;1408:19-36. doi: 10.1007/978-1-4939-3512-3_2.

Abstract

Photoreceptors are found in all kingdoms of life and mediate crucial responses to environmental challenges. Nature has evolved various types of photoresponsive protein structures with different chromophores and signaling concepts for their given purpose. The abundance of these signaling proteins as found nowadays by (meta-)genomic screens enriched the palette of optogenetic tools significantly. In addition, molecular insights into signal transduction mechanisms and design principles from biophysical studies and from structural and mechanistic comparison of homologous proteins opened seemingly unlimited possibilities for customizing the naturally occurring proteins for a given optogenetic task. Here, a brief overview on the photoreceptor concepts already established as optogenetic tools in natural or engineered form, their photochemistry and their signaling/design principles is given. Finally, so far not regarded photosensitive modules and protein architectures with potential for optogenetic application are described.

摘要

光感受器存在于所有生命王国中,并介导对环境挑战的关键反应。大自然已经进化出各种类型的光响应蛋白结构,这些结构具有不同的发色团和信号传导概念以实现其特定目的。如今通过(元)基因组筛选发现的这些信号蛋白的丰富性显著丰富了光遗传学工具的种类。此外,来自生物物理研究以及同源蛋白的结构和机制比较的对信号转导机制和设计原理的分子见解,为针对给定的光遗传学任务定制天然存在的蛋白质开辟了看似无限的可能性。在此,对已经以天然或工程形式确立为光遗传学工具的光感受器概念、它们的光化学以及它们的信号传导/设计原理进行简要概述。最后,描述了迄今为止尚未被视为具有光遗传学应用潜力的光敏模块和蛋白质结构。

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