School of Pharmaceutical Sciences, University of Geneva and University of Lausanne, Geneva, Switzerland.
School of Pharmaceutical Sciences, University of Geneva and University of Lausanne, Geneva, Switzerland; Swiss Centre for Applied Human Toxicology (SCAHT), Universities of Basel and Geneva, Basel, Switzerland; Human Protein Sciences Department, University of Geneva, Geneva, Switzerland.
Anal Chim Acta. 2016 Apr 15;916:8-16. doi: 10.1016/j.aca.2016.02.014. Epub 2016 Feb 19.
The untargeted profiling of steroids constitutes a growing research field because of their importance as biomarkers of endocrine disruption. New technologies in analytical chemistry, such as ultra high-pressure liquid chromatography coupled with mass spectrometry (MS), offer the possibility of a fast and sensitive analysis. Nevertheless, difficulties regarding steroid identification are encountered when considering isotopomeric steroids. Thus, the use of retention times is of great help for the unambiguous identification of steroids. In this context, starting from the linear solvent strength (LSS) theory, quantitative structure retention relationship (QSRR) models, based on a dataset composed of 91 endogenous steroids and VolSurf + descriptors combined with a new dedicated molecular fingerprint, were developed to predict retention times of steroid structures in any gradient mode conditions. Satisfactory performance was obtained during nested cross-validation with a predictive ability (Q(2)) of 0.92. The generalisation ability of the model was further confirmed by an average error of 4.4% in external prediction. This allowed the list of candidates associated with identical monoisotopic masses to be strongly reduced, facilitating definitive steroid identification.
由于类固醇作为内分泌干扰物生物标志物的重要性,非靶向性类固醇分析成为一个不断发展的研究领域。分析化学中的新技术,如超高压液相色谱与质谱联用(MS),为快速灵敏的分析提供了可能。然而,在考虑同量异位类固醇时,类固醇的鉴定存在困难。因此,保留时间的使用对于类固醇的明确鉴定非常有帮助。在这种情况下,基于线性溶剂强度(LSS)理论,我们开发了基于包含 91 种内源性类固醇和 VolSurf + 描述符的数据集以及新的专用分子指纹的定量结构保留关系(QSRR)模型,以预测任何梯度模式条件下的类固醇结构的保留时间。通过嵌套交叉验证,得到了令人满意的性能,预测能力(Q 2 )为 0.92。通过在外部预测中平均误差为 4.4%,进一步证实了模型的泛化能力。这使得与相同单同位素质量相关的候选列表大大减少,有助于确定类固醇的身份。