Daumke Oliver, Praefcke Gerrit J K
Kristallographie, Max-Delbrück Centrum Für Molekulare Medizin, Robert-Rössle-Straße 10, Berlin, 13125, Germany.
Institut Für Chemie und Biochemie, Freie Universität Berlin, Takustraße 3, Berlin, 14195, Germany.
Biopolymers. 2016 Aug;105(8):580-93. doi: 10.1002/bip.22855.
Dynamin superfamily proteins are multidomain mechano-chemical GTPases which are implicated in nucleotide-dependent membrane remodeling events. A prominent feature of these proteins is their assembly- stimulated mechanism of GTP hydrolysis. The molecular basis for this reaction has been initially clarified for the dynamin-related guanylate binding protein 1 (GBP1) and involves the transient dimerization of the GTPase domains in a parallel head-to-head fashion. A catalytic arginine finger from the phosphate binding (P-) loop is repositioned toward the nucleotide of the same molecule to stabilize the transition state of GTP hydrolysis. Dynamin uses a related dimerization-dependent mechanism, but instead of the catalytic arginine, a monovalent cation is involved in catalysis. Still another variation of the GTP hydrolysis mechanism has been revealed for the dynamin-like Irga6 which bears a glycine at the corresponding position in the P-loop. Here, we highlight conserved and divergent features of GTP hydrolysis in dynamin superfamily proteins and show how nucleotide binding and hydrolysis are converted into mechano-chemical movements. We also describe models how the energy of GTP hydrolysis can be harnessed for diverse membrane remodeling events, such as membrane fission or fusion. © 2016 Wiley Periodicals, Inc. Biopolymers 105: 580-593, 2016.
发动蛋白超家族蛋白是多结构域的机械化学GTP酶,参与依赖核苷酸的膜重塑事件。这些蛋白的一个显著特征是其组装刺激的GTP水解机制。最初已阐明发动蛋白相关鸟苷酸结合蛋白1(GBP1)的这一反应的分子基础,它涉及GTP酶结构域以平行头对头方式的瞬时二聚化。来自磷酸结合(P-)环的催化精氨酸指重新定位到同一分子的核苷酸上,以稳定GTP水解的过渡态。发动蛋白采用相关的依赖二聚化的机制,但催化过程中涉及的不是催化精氨酸,而是一价阳离子。对于发动蛋白样Irga6,在P环的相应位置有一个甘氨酸,已揭示出GTP水解机制的另一种变体。在这里,我们强调发动蛋白超家族蛋白中GTP水解的保守和不同特征,并展示核苷酸结合和水解如何转化为机械化学运动。我们还描述了如何利用GTP水解的能量进行各种膜重塑事件,如膜裂变或融合。©2016威利期刊公司。生物聚合物105:580 - 593,2016。