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一个槲寄生的故事:分子数据和物种分布模型揭示了冰川期后寄生花(桑寄生科)向中美洲云雾森林的入侵。

A mistletoe tale: postglacial invasion of Psittacanthus schiedeanus (Loranthaceae) to Mesoamerican cloud forests revealed by molecular data and species distribution modeling.

作者信息

Ornelas Juan Francisco, Gándara Etelvina, Vásquez-Aguilar Antonio Acini, Ramírez-Barahona Santiago, Ortiz-Rodriguez Andrés Ernesto, González Clementina, Mejía Saules María Teresa, Ruiz-Sanchez Eduardo

机构信息

Departamento de Biología Evolutiva, Instituto de Ecología, A.C., Carretera antigua a Coatepec No. 351, El Haya, Xalapa, Veracruz, 91070, Mexico.

Department of Plant and Microbial Biology & The University and Jepson Herbaria, University of California, Berkeley, 431 Koshland Hall, Berkeley, CA, 94270, USA.

出版信息

BMC Evol Biol. 2016 Apr 12;16:78. doi: 10.1186/s12862-016-0648-6.

DOI:10.1186/s12862-016-0648-6
PMID:27071983
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4830056/
Abstract

BACKGROUND

Ecological adaptation to host taxa is thought to result in mistletoe speciation via race formation. However, historical and ecological factors could also contribute to explain genetic structuring particularly when mistletoe host races are distributed allopatrically. Using sequence data from nuclear (ITS) and chloroplast (trnL-F) DNA, we investigate the genetic differentiation of 31 Psittacanthus schiedeanus (Loranthaceae) populations across the Mesoamerican species range. We conducted phylogenetic, population and spatial genetic analyses on 274 individuals of P. schiedeanus to gain insight of the evolutionary history of these populations. Species distribution modeling, isolation with migration and Bayesian inference methods were used to infer the evolutionary transition of mistletoe invasion, in which evolutionary scenarios were compared through posterior probabilities.

RESULTS

Our analyses revealed shallow levels of population structure with three genetic groups present across the sample area. Nine haplotypes were identified after sequencing the trnL-F intergenic spacer. These haplotypes showed phylogeographic structure, with three groups with restricted gene flow corresponding to the distribution of individuals/populations separated by habitat (cloud forest localities from San Luis Potosí to northwestern Oaxaca and Chiapas, localities with xeric vegetation in central Oaxaca, and localities with tropical deciduous forests in Chiapas), with post-glacial population expansions and potentially corresponding to post-glacial invasion types. Similarly, 44 ITS ribotypes suggest phylogeographic structure, despite the fact that most frequent ribotypes are widespread indicating effective nuclear gene flow via pollen. Gene flow estimates, a significant genetic signal of demographic expansion, and range shifts under past climatic conditions predicted by species distribution modeling suggest post-glacial invasion of P. schiedeanus mistletoes to cloud forests. However, Approximate Bayesian Computation (ABC) analyses strongly supported a scenario of simultaneous divergence among the three groups isolated recently.

CONCLUSIONS

Our results provide support for the predominant role of isolation and environmental factors in driving genetic differentiation of Mesoamerican parrot-flower mistletoes. The ABC results are consistent with a scenario of post-glacial mistletoe invasion, independent of host identity, and that habitat types recently isolated P. schiedeanus populations, accumulating slight phenotypic differences among genetic groups due to recent migration across habitats. Under this scenario, climatic fluctuations throughout the Pleistocene would have altered the distribution of suitable habitat for mistletoes throughout Mesoamerica leading to variation in population continuity and isolation. Our findings add to an understanding of the role of recent isolation and colonization in shaping cloud forest communities in the region.

摘要

背景

生态适应宿主分类群被认为会通过小种形成导致槲寄生物种形成。然而,历史和生态因素也可能有助于解释遗传结构,特别是当槲寄生宿主小种呈异域分布时。利用来自核(ITS)和叶绿体(trnL-F)DNA的序列数据,我们研究了中美洲物种分布范围内31个施氏鹦鹉槲寄生(Psittacanthus schiedeanus,桑寄生科)种群的遗传分化。我们对274个施氏鹦鹉槲寄生个体进行了系统发育、种群和空间遗传分析,以深入了解这些种群的进化历史。使用物种分布建模、隔离与迁移以及贝叶斯推断方法来推断槲寄生入侵的进化转变,通过后验概率比较进化情景。

结果

我们的分析揭示了种群结构水平较浅,样本区域内存在三个遗传组。对trnL-F基因间隔区进行测序后鉴定出9种单倍型。这些单倍型显示出系统地理学结构,有三个基因流受限的组,分别对应于被栖息地分隔的个体/种群分布(从圣路易斯波托西到瓦哈卡州西北部和恰帕斯州的云雾林地区、瓦哈卡州中部干旱植被地区以及恰帕斯州热带落叶林地区),存在冰后期种群扩张,可能对应冰后期入侵类型。同样,44种ITS核糖型表明存在系统地理学结构,尽管最常见的核糖型广泛分布,表明通过花粉实现了有效的核基因流动。基因流估计、人口扩张的显著遗传信号以及物种分布建模预测的过去气候条件下的范围变化表明,施氏鹦鹉槲寄生在冰后期入侵了云雾林。然而,近似贝叶斯计算(ABC)分析强烈支持最近隔离的三个组同时分化的情景。

结论

我们的结果支持隔离和环境因素在推动中美洲鹦鹉花槲寄生遗传分化中起主要作用。ABC结果与冰后期槲寄生入侵的情景一致,与宿主身份无关,并且栖息地类型最近隔离了施氏鹦鹉槲寄生种群,由于最近跨栖息地迁移,各遗传组之间积累了轻微的表型差异。在这种情景下,整个更新世的气候波动会改变中美洲适合槲寄生生存的栖息地分布,导致种群连续性和隔离的变化。我们的研究结果有助于理解近期隔离和定殖在塑造该地区云雾林群落中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ea13/4830056/560f819ffc8e/12862_2016_648_Fig7_HTML.jpg
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