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(查姆. & 施尔特德尔)G.唐(檀香目:桑寄生科)的完整叶绿体基因组序列,鹦鹉桑寄生族中首个槲寄生物种的质体基因组。

The complete chloroplast genome sequence of (Cham. & Schltdl.) G.Don. (Santalales: Loranthaceae), the first plastome of a mistletoe species in the Psittacantheae tribe.

作者信息

Morales-Saldaña Saddan, Villafán Emanuel, Vásquez-Aguilar Antonio Acini, Ramírez-Barahona Santiago, Ibarra-Laclette Enrique, Ornelas Juan Francisco

机构信息

Red de Biología Evolutiva, Instituto de Ecología, A.C. (INECOL), Xalapa, Veracruz, Mexico.

Red de Estudios Moleculares Avanzados, Instituto de Ecología, A.C. (INECOL), Xalapa, Veracruz, Mexico.

出版信息

Mitochondrial DNA B Resour. 2024 Jan 3;9(1):5-10. doi: 10.1080/23802359.2023.2298078. eCollection 2024.

Abstract

(Cham. & Schltdl.) G.Don., 1834, is a mistletoe species in the Loranthaceae, characteristic of the canopy in cloud forest edges and widely distributed in northern Mesoamerica. Here, we report the complete chloroplast genome sequence of , the first for a species in the Psittacantheae tribe. The circularized quadripartite structure of the chloroplast genome was 122,586 bp in length and included a large single-copy region of 72,507 bp and two inverted repeats of 21,283 bp separated by a small single-copy region of 7,513 bp. The genome contained 112 genes, of which 96 are unique, including 65 protein-coding genes, 27 transfer RNA, and four ribosomal RNA. The overall GC content in the plastome of is 36.9%. Based on 43 published complete chloroplast genome sequences for species in the families Loranthaceae and Santalaceae (Santalales), the maximum-likelihood phylogenetic tree with high-support bootstrap values indicated that in the Psittacantheae tribe is sister to the tribe Lorantheae. The chloroplast genome provided in this study represents a valuable resource for genetic, phylogenetic and conservation studies of species, and an important advance for unraveling the evolutionary history of these hemiparasitic plants.

摘要

(Cham. & Schltdl.)G.Don.,1834年,是桑寄生科的一种槲寄生物种,是云雾森林边缘树冠层的特征物种,广泛分布于中美洲北部。在此,我们报告了该物种的完整叶绿体基因组序列,这是鹦鹉桑寄生族中首个物种的叶绿体基因组序列。该叶绿体基因组的环状四分体结构长度为122,586 bp,包括一个72,507 bp的大单拷贝区域和两个21,283 bp的反向重复序列,中间由一个7,513 bp的小单拷贝区域隔开。该基因组包含112个基因,其中96个是独特的,包括65个蛋白质编码基因、27个转运RNA和4个核糖体RNA。该物种质体基因组的总体GC含量为36.9%。基于桑寄生科和檀香科(檀香目)43个已发表的完整叶绿体基因组序列,具有高支持率自展值的最大似然系统发育树表明,鹦鹉桑寄生族的该物种是桑寄生族的姐妹群。本研究提供的叶绿体基因组是该物种遗传、系统发育和保护研究的宝贵资源,也是揭示这些半寄生植物进化历史的重要进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97da/10769147/eb7df9c8a132/TMDN_A_2298078_F0002_C.jpg

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