Bigan Erwan, Paulevé Loïc, Steyaert Jean-Marc, Douady Stéphane
Laboratoire d'Informatique, École Polytechnique, Palaiseau, France.
Laboratoire Matière et Systèmes Complexes, Université Paris Diderot, Paris, France.
J Math Biol. 2016 Dec;73(6-7):1627-1664. doi: 10.1007/s00285-016-0998-0. Epub 2016 Apr 18.
We consider a generic protocell model consisting of any conservative chemical reaction network embedded within a membrane. The membrane results from the self-assembly of a membrane precursor and is semi-permeable to some nutrients. Nutrients are metabolized into all other species including the membrane precursor, and the membrane grows in area and the protocell in volume. Faithful replication through cell growth and division requires a doubling of both cell volume and surface area every division time (thus leading to a periodic surface area-to-volume ratio) and also requires periodic concentrations of the cell constituents. Building upon these basic considerations, we prove necessary and sufficient conditions pertaining to the chemical reaction network for such a regime to be met. A simple necessary condition is that every moiety must be fed. A stronger necessary condition implies that every siphon must be either fed, or connected to species outside the siphon through a pass reaction capable of transferring net positive mass into the siphon. And in the case of nutrient uptake through passive diffusion and of constant surface area-to-volume ratio, a sufficient condition for the existence of a fixed point is that every siphon be fed. These necessary and sufficient conditions hold for any chemical reaction kinetics, membrane parameters or nutrient flux diffusion constants.
我们考虑一个通用的原始细胞模型,它由嵌入膜内的任何保守化学反应网络组成。膜由膜前体的自组装形成,对某些营养物质具有半透性。营养物质被代谢为包括膜前体在内的所有其他物种,膜面积增加,原始细胞体积增大。通过细胞生长和分裂进行忠实复制要求每次分裂时细胞体积和表面积都加倍(从而导致表面积与体积比呈周期性变化),并且还要求细胞成分的浓度呈周期性变化。基于这些基本考虑,我们证明了满足这种情况的化学反应网络的必要和充分条件。一个简单的必要条件是每个部分都必须有物质供应。一个更强的必要条件意味着每个虹吸必须要么有物质供应,要么通过能够将净正质量转移到虹吸中的通过反应与虹吸外的物种相连。并且在通过被动扩散进行营养吸收以及表面积与体积比恒定的情况下,存在固定点的一个充分条件是每个虹吸都有物质供应。这些必要和充分条件适用于任何化学反应动力学、膜参数或营养通量扩散常数。