• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过环丁砜和间硝基苄醇对蛋白质进行超电荷化的机制:电喷雾过程的分子动力学模拟。

Mechanism of Protein Supercharging by Sulfolane and m-Nitrobenzyl Alcohol: Molecular Dynamics Simulations of the Electrospray Process.

机构信息

Department of Chemistry, The University of Western Ontario , London, Ontario N6A 5B7, Canada.

Department of Biochemistry, The University of Western Ontario , London, Ontario N6A 5C1, Canada.

出版信息

Anal Chem. 2016 May 17;88(10):5345-54. doi: 10.1021/acs.analchem.6b00650. Epub 2016 Apr 27.

DOI:10.1021/acs.analchem.6b00650
PMID:27093467
Abstract

Electrospray ionization (ESI) allows the production of intact gas-phase ions from proteins in solution. Nondenaturing solvent conditions usually culminate in low ESI charge states. However, many mass spectrometric applications benefit from protein ions that are more highly charged. One way to boost protein charge is the addition of supercharging agents (SCAs) such as sulfolane or m-nitrobenzyl alcohol (m-NBA) to the aqueous solution. The supercharging mechanism remains controversial. We use molecular dynamics (MD) simulations to examine how SCAs affect the behavior of ESI nanodroplets. Simulations were conducted on myoglobin in water, water/sulfolane, and water/m-NBA. Na(+) ions served as surrogate charge carriers instead of H(+). We focus on conditions where the protein initially adopts its native conformation. MD-generated charge states show remarkable agreement with experimental data. Droplet shrinkage is accompanied by Na(+) ejection, consistent with the ion evaporation model (IEM). The droplets segregate into an outer SCA shell and an aqueous core. This core harbors protein and Na(+). Unfavorable SCA solvation restricts Na(+) access to the droplet surface, thereby impeding IEM ejection. Rapid water loss causes SCA enrichment, ultimately forcing all remaining Na(+) to bind the protein. IEM ejection is no longer feasible after this point, such that the protein becomes supercharged by Na(+) trapping. SCA-free droplets produce lower charge states because the aqueous environment ensures a higher IEM efficiency. For all scenarios examined here, proteins are released via solvent evaporation to dryness, as envisioned by the charged residue model. Our data provide the first atomistic view of the supercharging mechanism.

摘要

电喷雾电离 (ESI) 允许从溶液中的蛋白质中产生完整的气相离子。非变性溶剂条件通常导致低 ESI 电荷状态。然而,许多质谱应用受益于具有更高电荷的蛋白质离子。一种提高蛋白质电荷的方法是向水溶液中添加超荷试剂 (SCA),例如环丁砜或间硝基苄醇 (m-NBA)。超荷机理仍存在争议。我们使用分子动力学 (MD) 模拟来研究 SCA 如何影响 ESI 纳米液滴的行为。在水中、水/环丁砜和水/m-NBA 中对肌红蛋白进行了模拟。Na(+) 离子用作替代电荷载体,而不是 H(+)。我们关注的是蛋白质最初采用其天然构象的条件。MD 生成的电荷状态与实验数据非常吻合。液滴收缩伴随着 Na(+) 的释放,这与离子蒸发模型 (IEM) 一致。液滴分离成一个外部 SCA 壳和一个水核。这个核心包含蛋白质和 Na(+)。不利的 SCA 溶剂化限制了 Na(+) 进入液滴表面,从而阻碍了 IEM 的释放。快速的水分流失导致 SCA 富集,最终迫使所有剩余的 Na(+)与蛋白质结合。在这一点之后,IEM 释放不再可行,因此蛋白质通过 Na(+) 捕获而被超荷。没有 SCA 的液滴产生较低的电荷状态,因为水相环境确保了更高的 IEM 效率。对于这里检查的所有情况,蛋白质通过溶剂蒸发释放到干燥状态,正如带电残基模型所设想的那样。我们的数据提供了超荷机理的第一个原子观点。

相似文献

1
Mechanism of Protein Supercharging by Sulfolane and m-Nitrobenzyl Alcohol: Molecular Dynamics Simulations of the Electrospray Process.通过环丁砜和间硝基苄醇对蛋白质进行超电荷化的机制:电喷雾过程的分子动力学模拟。
Anal Chem. 2016 May 17;88(10):5345-54. doi: 10.1021/acs.analchem.6b00650. Epub 2016 Apr 27.
2
Crown Ether Effects on the Location of Charge Carriers in Electrospray Droplets: Implications for the Mechanism of Protein Charging and Supercharging.冠醚对电喷雾液滴中电荷载体位置的影响:对蛋白质荷质比和超荷质比机制的启示。
Anal Chem. 2018 Mar 20;90(6):4126-4134. doi: 10.1021/acs.analchem.8b00099. Epub 2018 Mar 6.
3
Mechanism of Electrospray Supercharging for Unfolded Proteins: Solvent-Mediated Stabilization of Protonated Sites During Chain Ejection.电喷雾超压展开蛋白质的机制:在链喷射过程中溶剂介导的质子化位点稳定化。
Anal Chem. 2019 May 21;91(10):6943-6952. doi: 10.1021/acs.analchem.9b01470. Epub 2019 May 10.
4
Chain Ejection Model for Electrospray Ionization of Unfolded Proteins: Evidence from Atomistic Simulations and Ion Mobility Spectrometry.无折叠蛋白质电喷雾电离的链喷射模型:来自原子模拟和离子淌度谱的证据。
Anal Chem. 2018 Aug 21;90(16):10069-10077. doi: 10.1021/acs.analchem.8b02926. Epub 2018 Aug 8.
5
Effects of supercharging reagents on noncovalent complex structure in electrospray ionization from aqueous solutions.在水溶液中,电喷雾电离中超导试剂对非共价复合物结构的影响。
J Am Soc Mass Spectrom. 2010 Oct;21(10):1762-74. doi: 10.1016/j.jasms.2010.06.012. Epub 2010 Jun 25.
6
New supercharging reagents produce highly charged protein ions in native mass spectrometry.新型增压试剂在原生质谱中产生高电荷蛋白质离子。
Analyst. 2015 Nov 7;140(21):7184-94. doi: 10.1039/c5an01710f.
7
Enhancing Protein Electrospray Charge States by Multivalent Metal Ions: Mechanistic Insights from MD Simulations and Mass Spectrometry Experiments.多价金属离子增强蛋白质电喷雾荷质比:MD 模拟和质谱实验的机理研究。
J Am Soc Mass Spectrom. 2020 Jan 2;31(1):25-33. doi: 10.1021/jasms.9b00027. Epub 2019 Nov 21.
8
Protein conformation and supercharging with DMSO from aqueous solution.从水溶液中用 DMSO 进行蛋白质构象和超电荷。
J Am Soc Mass Spectrom. 2011 Jul;22(7):1178-86. doi: 10.1007/s13361-011-0116-x. Epub 2011 Apr 19.
9
Sulfolane-Induced Supercharging of Electrosprayed Salt Clusters: An Experimental/Computational Perspective.环丁砜诱导的电喷雾盐簇荷质比增强:实验/计算研究。
J Am Soc Mass Spectrom. 2021 Feb 3;32(2):486-496. doi: 10.1021/jasms.0c00377. Epub 2020 Dec 17.
10
Release of Native-like Gaseous Proteins from Electrospray Droplets via the Charged Residue Mechanism: Insights from Molecular Dynamics Simulations.通过带电残基机制从电喷雾液滴中释放类似天然的气态蛋白质:分子动力学模拟的见解。
J Am Chem Soc. 2015 Oct 7;137(39):12667-76. doi: 10.1021/jacs.5b07913. Epub 2015 Sep 25.

引用本文的文献

1
Molecular Dynamics Simulations of Native Protein Charging via Proton Transfer during Electrospray Ionization with Grotthuss Diffuse HO.通过质子转移对电喷雾电离过程中天然蛋白荷电的分子动力学模拟:涉及扩散质子的 Grotthuss 机制。
Anal Chem. 2024 Mar 12;96(10):4146-4153. doi: 10.1021/acs.analchem.3c05089. Epub 2024 Mar 1.
2
Surface Activity of Amines Provides Evidence for the Combined ESI Mechanism of Charge Reduction for Protein Complexes.胺的表面活性为蛋白质复合物的 ESI 电荷还原的联合机制提供了证据。
Anal Chem. 2022 Aug 2;94(30):10824-10831. doi: 10.1021/acs.analchem.2c01814. Epub 2022 Jul 21.
3
Electrospray ionization of native membrane proteins proceeds a charge equilibration step.
天然膜蛋白的电喷雾电离会经历一个电荷平衡步骤。
RSC Adv. 2022 Apr 1;12(16):9671-9680. doi: 10.1039/d2ra01282k. eCollection 2022 Mar 25.
4
Investigation of Charge-State-Dependent Compaction of Protein Ions with Native Ion Mobility-Mass Spectrometry and Theory.采用天然离子淌度-质谱和理论研究荷质比依赖性蛋白质离子的压缩。
J Am Soc Mass Spectrom. 2022 Feb 2;33(2):369-381. doi: 10.1021/jasms.1c00351. Epub 2022 Jan 24.
5
Charge Manipulation Using Solution and Gas-Phase Chemistry to Facilitate Analysis of Highly Heterogeneous Protein Complexes in Native Mass Spectrometry.利用溶液和气相化学进行荷质比操控,以促进天然质谱分析中高度异质的蛋白质复合物。
Anal Chem. 2021 Feb 23;93(7):3337-3342. doi: 10.1021/acs.analchem.0c05249. Epub 2021 Feb 10.
6
On the mechanism of protein supercharging in electrospray ionisation mass spectrometry: Effects on charging of additives with short- and long-chain alkyl constituents with carbonate and sulphite terminal groups.关于电喷雾电离质谱中蛋白质超荷电的机制:具有碳酸酯和亚硫酸酯端基的短链和长链烷基成分添加剂对荷电的影响。
Anal Chim Acta X. 2018 Dec 28;1:100004. doi: 10.1016/j.acax.2018.100004. eCollection 2019 Mar.
7
Gas-Phase Protonation Thermodynamics of Biological Lipids: Experiment, Theory, and Implications.生物脂质的气相质子化热力学:实验、理论与意义。
Anal Chem. 2020 Aug 4;92(15):10365-10374. doi: 10.1021/acs.analchem.0c00613. Epub 2020 Jul 19.
8
Chemical Additives Enable Native Mass Spectrometry Measurement of Membrane Protein Oligomeric State within Intact Nanodiscs.化学添加剂可使完整纳米盘内的膜蛋白寡聚状态进行 native mass spectrometry 测量。
J Am Chem Soc. 2019 Jan 16;141(2):1054-1061. doi: 10.1021/jacs.8b11529. Epub 2019 Jan 7.
9
Comprehensive Peptide Ion Structure Studies Using Ion Mobility Techniques: Part 3. Relating Solution-Phase to Gas-Phase Structures.使用离子淌度技术进行的综合肽离子结构研究:第3部分。将溶液相结构与气相结构相关联。
J Am Soc Mass Spectrom. 2018 Aug;29(8):1665-1677. doi: 10.1007/s13361-018-1996-9. Epub 2018 Jun 1.
10
Electrothermal supercharging of proteins in native MS: effects of protein isoelectric point, buffer, and nanoESI-emitter tip size.在 native MS 中对蛋白质进行电热超增压:蛋白质等电点、缓冲液和纳喷电喷雾发射器尖端大小的影响。
Analyst. 2016 Oct 7;141(19):5598-606. doi: 10.1039/c6an01380e. Epub 2016 Jul 21.