• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

降水模式的转变促进了引入的咖啡品种的种间杂交。

Shift in precipitation regime promotes interspecific hybridization of introduced Coffea species.

作者信息

Gomez Céline, Despinoy Marc, Hamon Serge, Hamon Perla, Salmon Danyela, Akaffou Doffou Sélastique, Legnate Hyacinthe, de Kochko Alexandre, Mangeas Morgan, Poncet Valérie

机构信息

IRD UMR DIADE BP 64501 34394 Montpellier Cedex 5 France.

IRD UMR ESPACE DEV (S140) BP A5 98848 Cedex Nouméa Nouvelle Calédonie.

出版信息

Ecol Evol. 2016 Apr 8;6(10):3240-55. doi: 10.1002/ece3.2055. eCollection 2016 May.

DOI:10.1002/ece3.2055
PMID:27096083
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4829533/
Abstract

The frequency of plant species introductions has increased in a highly connected world, modifying species distribution patterns to include areas outside their natural ranges. These introductions provide the opportunity to gain new insight into the importance of flowering phenology as a component of adaptation to a new environment. Three Coffea species, C. arabica, C. canephora (Robusta), and C. liberica, native to intertropical Africa have been introduced to New Caledonia. On this archipelago, a secondary contact zone has been characterized where these species coexist, persist, and hybridize spontaneously. We investigated the impact of environmental changes undergone by each species following its introduction in New Caledonia on flowering phenology and overcoming reproductive barriers between sister species. We developed species distribution models and compared both environmental envelopes and climatic niches between native and introduced hybrid zones. Flowering phenology was monitored in a population in the hybrid zone along with temperature and precipitation sequences recorded at a nearby weather station. The extent and nature of hybridization events were characterized using chloroplast and nuclear microsatellite markers. The three Coffea species encountered weak environmental suitability compared to their native ranges when introduced to New Caledonia, especially C. arabica and C. canephora. The niche of the New Caledonia hybrid zone was significantly different from all three species' native niches based on identity tests (I Similarity and D Schoener's Similarity Indexes). This area appeared to exhibit intermediate conditions between the native conditions of the three species for temperature-related variables and divergent conditions for precipitation-related ones. Flowering pattern in these Coffea species was shown to have a strong genetic component that determined the time between the triggering rain and anthesis (flower opening), specific to each species. However, a precipitation regime different from those in Africa was directly involved in generating partial flowering overlap between species and thus in allowing hybridization and interspecific gene flow. Interspecific hybrids accounted for 4% of the mature individuals in the sympatric population and occurred between each pair of species with various level of introgression. Adaptation to new environmental conditions following introduction of Coffea species to New Caledonia has resulted in a secondary contact between three related species, which would not have happened in their native ranges, leading to hybridization and gene flow.

摘要

在一个高度互联的世界中,植物物种引入的频率有所增加,改变了物种分布模式,使其范围扩展到自然分布区域之外。这些引入为深入了解开花物候作为适应新环境的一个组成部分的重要性提供了契机。原产于热带非洲的三种咖啡属物种,即阿拉比卡咖啡(C. arabica)、卡内弗拉咖啡(C. canephora,又称罗布斯塔咖啡)和利比里卡咖啡(C. liberica),已被引入新喀里多尼亚。在这个群岛上,已确定了一个次生接触区,这些物种在那里共存、存续并自发杂交。我们研究了每种咖啡属物种引入新喀里多尼亚后所经历的环境变化对开花物候以及克服姐妹种之间生殖障碍的影响。我们构建了物种分布模型,并比较了原生区和引入杂交区的环境包络和气候生态位。在杂交区的一个种群中监测了开花物候,并记录了附近气象站的温度和降水序列。利用叶绿体和核微卫星标记对杂交事件的范围和性质进行了表征。与它们在原生范围内相比,这三种咖啡属物种引入新喀里多尼亚后环境适宜性较弱,尤其是阿拉比卡咖啡和卡内弗拉咖啡。基于同一性检验(I相似性和D舍纳相似性指数),新喀里多尼亚杂交区的生态位与这三个物种的原生生态位均有显著差异。对于与温度相关的变量,该区域似乎呈现出这三个物种原生条件之间的中间状态,而对于与降水相关的变量,则呈现出不同的状态。这些咖啡属物种的开花模式显示出具有很强的遗传成分,它决定了触发降雨和开花(花朵开放)之间的时间,这因物种而异。然而,与非洲不同的降水模式直接导致了物种间部分开花重叠,从而使得杂交和种间基因流动成为可能。种间杂种占同域种群中成熟个体的4%,并且在每对物种之间都有发生,且渗入程度各不相同。将咖啡属物种引入新喀里多尼亚后,对新环境条件的适应导致了三个相关物种之间的次生接触,而这在它们的原生范围内是不会发生的,进而导致了杂交和基因流动。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad8f/4870209/41da332ae0c5/ECE3-6-3240-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad8f/4870209/dcdef4fab5f6/ECE3-6-3240-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad8f/4870209/34de2afc4930/ECE3-6-3240-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad8f/4870209/0f65c61466b8/ECE3-6-3240-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad8f/4870209/41da332ae0c5/ECE3-6-3240-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad8f/4870209/dcdef4fab5f6/ECE3-6-3240-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad8f/4870209/34de2afc4930/ECE3-6-3240-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad8f/4870209/0f65c61466b8/ECE3-6-3240-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ad8f/4870209/41da332ae0c5/ECE3-6-3240-g004.jpg

相似文献

1
Shift in precipitation regime promotes interspecific hybridization of introduced Coffea species.降水模式的转变促进了引入的咖啡品种的种间杂交。
Ecol Evol. 2016 Apr 8;6(10):3240-55. doi: 10.1002/ece3.2055. eCollection 2016 May.
2
Introgressive hybridization between the allotetraploid Coffea arabica and one of its diploid ancestors, Coffea canephora, in an exceptional sympatric zone in New Caledonia.在新喀里多尼亚一个特殊的同域分布区域,异源四倍体阿拉伯咖啡与其二倍体祖先之一卡尼弗拉咖啡之间发生了渐渗杂交。
Genome. 2007 Mar;50(3):316-24. doi: 10.1139/g07-011.
3
Genetic diversity of native and cultivated Ugandan Robusta coffee (Coffea canephora Pierre ex A. Froehner): Climate influences, breeding potential and diversity conservation.遗传多样性的本地和栽培乌干达罗布斯塔咖啡(咖啡 canephora 皮埃尔前 A. Froehner):气候的影响,育种潜力和多样性保护。
PLoS One. 2021 Feb 8;16(2):e0245965. doi: 10.1371/journal.pone.0245965. eCollection 2021.
4
Factors influencing gene introgression into the allotetraploid Coffea arabica L. from its diploid relatives.影响基因从二倍体近缘种渗入到异源四倍体阿拉伯咖啡中的因素。
Genome. 2004 Dec;47(6):1053-60. doi: 10.1139/g04-048.
5
Crop-to-wild gene flow in wild coffee species: the case of Coffea canephora in the Democratic Republic of the Congo.野生咖啡物种中的作物到野生基因流动:以刚果民主共和国的卡内弗拉咖啡为例。
Ann Bot. 2024 May 13;133(7):917-930. doi: 10.1093/aob/mcae034.
6
Use of fluorescence in situ hybridization as a tool for introgression analysis and chromosome identification in coffee (Coffea arabica L.).利用荧光原位杂交作为咖啡(阿拉伯咖啡)渐渗分析和染色体鉴定的工具。
Genome. 2007 Jul;50(7):619-26. doi: 10.1139/g07-034.
7
Gene introgression into Coffea arabica by way of triploid hybrids (C. arabica x C. canephora).通过三倍体杂种(阿拉伯咖啡×卡内弗拉咖啡)将基因渗入阿拉伯咖啡。
Heredity (Edinb). 2002 Dec;89(6):488-94. doi: 10.1038/sj.hdy.6800171.
8
Lost and Found: and , the Forgotten Coffee Crop Species of West Africa.失而复得:西非被遗忘的咖啡作物品种
Front Plant Sci. 2020 May 19;11:616. doi: 10.3389/fpls.2020.00616. eCollection 2020.
9
Ecological and genomic vulnerability to climate change across native populations of Robusta coffee (Coffea canephora).罗布斯塔咖啡(Coffea canephora)原生种群对气候变化的生态和基因组脆弱性。
Glob Chang Biol. 2022 Jul;28(13):4124-4142. doi: 10.1111/gcb.16191. Epub 2022 May 8.
10
Introgression into the allotetraploid coffee ( Coffea arabica L.): segregation and recombination of the C. canephora genome in the tetraploid interspecific hybrid ( C. arabicax C. canephora).渗入到异源四倍体咖啡(阿拉伯咖啡)中:四倍体种间杂种(阿拉伯咖啡×卡内弗拉咖啡)中卡内弗拉咖啡基因组的分离与重组。
Theor Appl Genet. 2002 Mar;104(4):661-668. doi: 10.1007/s001220100747.

引用本文的文献

1
Crop-to-wild gene flow in wild coffee species: the case of Coffea canephora in the Democratic Republic of the Congo.野生咖啡物种中的作物到野生基因流动:以刚果民主共和国的卡内弗拉咖啡为例。
Ann Bot. 2024 May 13;133(7):917-930. doi: 10.1093/aob/mcae034.
2
A chromosome-scale assembly reveals chromosomal aberrations and exchanges generating genetic diversity in Coffea arabica germplasm.一个染色体尺度的组装揭示了咖啡属种质遗传多样性的染色体畸变和易位。
Nat Commun. 2024 Jan 23;15(1):463. doi: 10.1038/s41467-023-44449-8.
3
Genetic diversity of native and cultivated Ugandan Robusta coffee (Coffea canephora Pierre ex A. Froehner): Climate influences, breeding potential and diversity conservation.

本文引用的文献

1
Predicting species distribution: offering more than simple habitat models.预测物种分布:提供的不仅仅是简单的栖息地模型。
Ecol Lett. 2005 Sep;8(9):993-1009. doi: 10.1111/j.1461-0248.2005.00792.x. Epub 2005 Jun 23.
2
The extent of hybridization and its impact on the genetic diversity and population structure of an invasive tree, Ulmus pumila (Ulmaceae).杂交的程度及其对入侵树种榆树(榆科)的遗传多样性和种群结构的影响。
Evol Appl. 2010 Mar;3(2):157-68. doi: 10.1111/j.1752-4571.2009.00106.x.
3
Hybridization and invasion: one of North America's most devastating invasive plants shows evidence for a history of interspecific hybridization.
遗传多样性的本地和栽培乌干达罗布斯塔咖啡(咖啡 canephora 皮埃尔前 A. Froehner):气候的影响,育种潜力和多样性保护。
PLoS One. 2021 Feb 8;16(2):e0245965. doi: 10.1371/journal.pone.0245965. eCollection 2021.
4
Phenotypic diversity assessment within a major ex situ collection of wild endemic coffees in Madagascar.马达加斯加主要野生特有咖啡居群的表型多样性评估。
Ann Bot. 2020 Oct 6;126(5):849-863. doi: 10.1093/aob/mcaa073.
5
Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.叶绿体基因组注释工具的评估及其在咖啡物种进化分析中的应用。
PLoS One. 2019 Jun 12;14(6):e0216347. doi: 10.1371/journal.pone.0216347. eCollection 2019.
6
Development and evaluation of a genome-wide Coffee 8.5K SNP array and its application for high-density genetic mapping and for investigating the origin of Coffea arabica L.开发和评估一个全基因组 Coffee 8.5K SNP 阵列及其在高密度遗传图谱构建和咖啡起源研究中的应用。
Plant Biotechnol J. 2019 Jul;17(7):1418-1430. doi: 10.1111/pbi.13066. Epub 2019 Feb 4.
7
The Effect of Altered Soil Moisture on Hybridization Rate in a Crop-Wild System (Raphanus spp.).土壤湿度变化对作物-野生系统(萝卜属)杂交率的影响
PLoS One. 2016 Dec 9;11(12):e0166802. doi: 10.1371/journal.pone.0166802. eCollection 2016.
杂交与入侵:北美最具破坏力的入侵植物之一显示出种间杂交历史的证据。
Evol Appl. 2010 Jan;3(1):40-51. doi: 10.1111/j.1752-4571.2009.00097.x. Epub 2009 Aug 27.
4
The coffee genome hub: a resource for coffee genomes.咖啡基因组中心:咖啡基因组的资源库。
Nucleic Acids Res. 2015 Jan;43(Database issue):D1028-35. doi: 10.1093/nar/gku1108. Epub 2014 Nov 11.
5
The coffee genome provides insight into the convergent evolution of caffeine biosynthesis.咖啡基因组为咖啡因生物合成的趋同进化提供了线索。
Science. 2014 Sep 5;345(6201):1181-4. doi: 10.1126/science.1255274. Epub 2014 Sep 4.
6
Inheritance and restriction fragment length polymorphism of chloroplast DNA in the genus Coffea L.咖啡属叶绿体 DNA 的遗传和限制片段长度多态性
Theor Appl Genet. 1996 Sep;93(4):626-32. doi: 10.1007/BF00417958.
7
Rapid adaptation to climate facilitates range expansion of an invasive plant.快速适应气候促进了入侵植物的分布范围扩大。
Science. 2013 Oct 18;342(6156):364-6. doi: 10.1126/science.1242121.
8
Temperature-dependent shifts in phenology contribute to the success of exotic species with climate change.物候对温度的依赖性变化有助于外来物种在气候变化中取得成功。
Am J Bot. 2013 Jul;100(7):1407-21. doi: 10.3732/ajb.1200478.
9
Phenological tracking enables positive species responses to climate change.物候跟踪使物种对气候变化做出积极响应成为可能。
Ecology. 2012 Aug;93(8):1765-71. doi: 10.1890/11-1912.1.
10
GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update.GenAlEx 6.5:Excel 中的遗传分析。用于教学和研究的种群遗传软件--更新。
Bioinformatics. 2012 Oct 1;28(19):2537-9. doi: 10.1093/bioinformatics/bts460. Epub 2012 Jul 20.