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利用环境DNA分析检测成年绿鲟

Detection of Adult Green Sturgeon Using Environmental DNA Analysis.

作者信息

Bergman Paul S, Schumer Gregg, Blankenship Scott, Campbell Elizabeth

机构信息

Cramer Fish Sciences, West Sacramento, California, United States of America.

United States Fish and Wildlife Service, Anadromous Fish Restoration Program, Lodi, Caifornia, United States of America.

出版信息

PLoS One. 2016 Apr 20;11(4):e0153500. doi: 10.1371/journal.pone.0153500. eCollection 2016.

Abstract

Environmental DNA (eDNA) is an emerging sampling method that has been used successfully for detection of rare aquatic species. The Identification of sampling tools that are less stressful for target organisms has become increasingly important for rare and endangered species. A decline in abundance of the Southern Distinct Population Segment (DPS) of North American Green Sturgeon located in California's Central Valley has led to its listing as Threatened under the Federal Endangered Species Act in 2006. While visual surveys of spawning Green Sturgeon in the Central Valley are effective at monitoring fish densities in concentrated pool habitats, results do not scale well to the watershed level, providing limited spatial and temporal context. Unlike most traditional survey methods, environmental DNA analysis provides a relatively quick, inexpensive tool that could efficiently monitor the presence and distribution of aquatic species. We positively identified Green Sturgeon DNA at two locations of known presence in the Sacramento River, proving that eDNA can be effective for monitoring the presence of adult sturgeon. While further study is needed to understand uncertainties of the sampling method, our study represents the first documented detection of Green Sturgeon eDNA, indicating that eDNA analysis could provide a new tool for monitoring Green Sturgeon distribution in the Central Valley, complimenting traditional on-going survey methods.

摘要

环境DNA(eDNA)是一种新兴的采样方法,已成功用于检测珍稀水生物种。对于珍稀濒危物种而言,识别对目标生物压力较小的采样工具变得越来越重要。位于加利福尼亚中央谷地的北美绿鲟南部分布种群(DPS)数量下降,导致其在2006年被列入联邦《濒危物种法》的受威胁物种名单。虽然对中央谷地绿鲟产卵情况的目视调查在监测集中水池栖息地的鱼类密度方面很有效,但结果在流域层面的扩展性不佳,提供的时空背景有限。与大多数传统调查方法不同,环境DNA分析提供了一种相对快速、廉价的工具,可以有效地监测水生物种的存在和分布。我们在萨克拉门托河已知有绿鲟存在的两个地点阳性鉴定出了绿鲟DNA,证明eDNA可有效监测成年鲟鱼的存在。虽然需要进一步研究来了解该采样方法的不确定性,但我们的研究首次记录了绿鲟eDNA的检测情况,表明eDNA分析可为监测中央谷地绿鲟的分布提供一种新工具,补充现有的传统调查方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e50/4838217/fa3a05e5d1a5/pone.0153500.g001.jpg

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