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本文引用的文献

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Cross-species Transcriptomic Comparison of In Vitro and In Vivo Mammalian Neural Cells.体外和体内哺乳动物神经细胞的跨物种转录组学比较
Bioinform Biol Insights. 2015 Nov 25;9:153-64. doi: 10.4137/BBI.S33124. eCollection 2015.
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The BRAIN Initiative: developing technology to catalyse neuroscience discovery.大脑计划:开发技术以促进神经科学发现。
Philos Trans R Soc Lond B Biol Sci. 2015 May 19;370(1668). doi: 10.1098/rstb.2014.0164.
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Application of next-generation sequencing technologies in Neurology.下一代测序技术在神经病学中的应用。
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Intracellular calcium dynamics permit a Purkinje neuron model to perform toggle and gain computations upon its inputs.细胞内钙离子动力学使浦肯野神经元模型能够对其输入进行切换和增益计算。
Front Comput Neurosci. 2014 Aug 20;8:86. doi: 10.3389/fncom.2014.00086. eCollection 2014.
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An RNA-sequencing transcriptome and splicing database of glia, neurons, and vascular cells of the cerebral cortex.大脑皮层神经胶质细胞、神经元和血管细胞的 RNA 测序转录组和剪接数据库。
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The challenge of connecting the dots in the B.R.A.I.N.连接大脑中的点的挑战
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Unraveling the complex metabolic nature of astrocytes.解析星形胶质细胞复杂的代谢特性。
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Neuroscience thinks big (and collaboratively).神经科学想得很大(而且是合作地想)。
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Acute isolation and transcriptome characterization of cortical astrocytes and microglia from young and aged mice.从年轻和老年小鼠中急性分离和转录组特征分析皮质星形胶质细胞和小胶质细胞。
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A neurodegeneration-specific gene-expression signature of acutely isolated microglia from an amyotrophic lateral sclerosis mouse model.急性分离肌萎缩侧索硬化症小鼠模型小胶质细胞的神经退行性变特异性基因表达特征。
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哺乳动物大脑中的细胞类型特异性转录组谱分析。

Cell type-specific transcriptome profiling in mammalian brains.

机构信息

Thomas H. Gosnell School of Life Sciences, Rochester Institute of Technology, One Lomb Memorial Dr., Rochester, NY 14623.

Thomas H. Gosnell School of Life Sciences, Rochester Institute of Technology, One Lomb Memorial Dr., Rochester, NY 14623,

出版信息

Front Biosci (Landmark Ed). 2016 Jun 1;21(5):973-85. doi: 10.2741/4434.

DOI:10.2741/4434
PMID:27100485
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4990780/
Abstract

A mammalian brain contains numerous types of cells. Advances in neuroscience in the past decade allow us to identify and isolate neural cells of interest from mammalian brains. Recent developments in high-throughput technologies, such as microarrays and next-generation sequencing (NGS), provide detailed information on gene expression in pooled cells on a genomic scale. As a result, many novel genes have been found critical in cell type-specific transcriptional regulation. These differentially expressed genes can be used as molecular signatures, unique to a particular class of neural cells. Use of this gene expression-based approach can further differentiate neural cell types into subtypes, potentially linking some of them with neurological diseases. In this article, experimental techniques used to purify neural cells are described, followed by a review on recent microarray- or NGS-based transcriptomic studies of common neural cell types. The future prospects of cell type-specific research are also discussed.

摘要

哺乳动物的大脑包含多种类型的细胞。过去十年神经科学的进步使我们能够从哺乳动物大脑中识别和分离出感兴趣的神经细胞。高通量技术(如微阵列和下一代测序(NGS))的最新发展提供了关于在基因组范围内混合细胞中基因表达的详细信息。结果,许多新的基因被发现对细胞类型特异性转录调控至关重要。这些差异表达的基因可用作分子特征,是特定类别的神经细胞所特有的。使用这种基于基因表达的方法可以进一步将神经细胞类型细分为亚型,可能将其中一些与神经疾病联系起来。本文描述了用于纯化神经细胞的实验技术,并对常见神经细胞类型的基于微阵列或 NGS 的转录组学研究进行了综述。还讨论了细胞类型特异性研究的未来前景。