Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect.
作者信息
Selvaratnam Chitra, Thevarajoo Suganthi, Ee Robson, Chan Kok-Gan, Bennett Joseph P, Goh Kian Mau, Chong Chun Shiong
机构信息
Faculty of Biosciences and Medical Engineering, Universiti Teknologi Malaysia, 81310 Skudai, Johor, Malaysia.
Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia.
出版信息
Mar Genomics. 2016 Aug;28:29-31. doi: 10.1016/j.margen.2016.04.004. Epub 2016 Apr 20.
Roseivirga sp. strain D-25 is an aerobic marine bacterium isolated from seawater collected from Desaru beach, Malaysia. To date, the genus Roseivirga consists of only four species with no genome sequence reported. Here, we present the genome sequence of Roseivirga sp. strain D-25 (=KCTC 42709=DSM 101709), with a genome size of approximately 4.08Mbp and G+C content of 39.18%. Genome sequence analysis of strain D-25 revealed the presence of genes related to petroleum hydrocarbon degradation, 2,4,6-trinitrotoluene detoxification, heavy metals bioremediation and production of carotenoids, which shed light on the potential application of this strain.
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