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冷冻电子显微镜揭示的Rvb1-Rvb2 AAA+复合物的结构及核苷酸依赖性构象变化

Architecture and Nucleotide-Dependent Conformational Changes of the Rvb1-Rvb2 AAA+ Complex Revealed by Cryoelectron Microscopy.

作者信息

Ewens Caroline A, Su Min, Zhao Liang, Nano Nardin, Houry Walid A, Southworth Daniel R

机构信息

Department of Biological Chemistry, Life Sciences Institute, University of Michigan, Ann Arbor, MI 48109, USA.

Department of Biochemistry, University of Toronto, Toronto, ON M5S 1A8, Canada.

出版信息

Structure. 2016 May 3;24(5):657-666. doi: 10.1016/j.str.2016.03.018. Epub 2016 Apr 21.

Abstract

Rvb1 and Rvb2 are essential AAA+ proteins that interact together during the assembly and activity of diverse macromolecules including chromatin remodelers INO80 and SWR-C, and ribonucleoprotein complexes including telomerase and snoRNPs. ATP hydrolysis by Rvb1/2 is required for function; however, the mechanism that drives substrate remodeling is unknown. Here we determined the architecture of the yeast Rvb1/2 dodecamer using cryoelectron microscopy and identify that the substrate-binding insertion domain undergoes conformational changes in response to nucleotide state. 2D and 3D classification defines the dodecamer flexibility, revealing distinct arrangements and the hexamer-hexamer interaction interface. Reconstructions of the apo, ATP, and ADP states identify that Rvb1/2 undergoes substantial conformational changes that include a twist in the insertion-domain position and a corresponding rotation of the AAA+ ring. These results reveal how the ATP hydrolysis cycle of the AAA+ domains directs insertion-domain movements that could provide mechanical force during remodeling or helicase activities.

摘要

Rvb1和Rvb2是必需的AAA+蛋白,它们在包括染色质重塑因子INO80和SWR-C在内的多种大分子以及包括端粒酶和小核仁核糖核蛋白颗粒(snoRNPs)在内的核糖核蛋白复合物的组装和活性过程中相互作用。Rvb1/2的ATP水解是其功能所必需的;然而,驱动底物重塑的机制尚不清楚。在这里,我们使用冷冻电子显微镜确定了酵母Rvb1/2十二聚体的结构,并发现底物结合插入结构域会响应核苷酸状态而发生构象变化。二维和三维分类定义了十二聚体的灵活性,揭示了不同的排列方式以及六聚体-六聚体相互作用界面。对空载、ATP和ADP状态的重建表明,Rvb1/2会发生大量构象变化,包括插入结构域位置的扭曲以及AAA+环的相应旋转。这些结果揭示了AAA+结构域的ATP水解循环如何指导插入结构域的运动,而这种运动可能在重塑或解旋酶活性过程中提供机械力。

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