Ewens Caroline A, Su Min, Zhao Liang, Nano Nardin, Houry Walid A, Southworth Daniel R
Department of Biological Chemistry, Life Sciences Institute, University of Michigan, Ann Arbor, MI 48109, USA.
Department of Biochemistry, University of Toronto, Toronto, ON M5S 1A8, Canada.
Structure. 2016 May 3;24(5):657-666. doi: 10.1016/j.str.2016.03.018. Epub 2016 Apr 21.
Rvb1 and Rvb2 are essential AAA+ proteins that interact together during the assembly and activity of diverse macromolecules including chromatin remodelers INO80 and SWR-C, and ribonucleoprotein complexes including telomerase and snoRNPs. ATP hydrolysis by Rvb1/2 is required for function; however, the mechanism that drives substrate remodeling is unknown. Here we determined the architecture of the yeast Rvb1/2 dodecamer using cryoelectron microscopy and identify that the substrate-binding insertion domain undergoes conformational changes in response to nucleotide state. 2D and 3D classification defines the dodecamer flexibility, revealing distinct arrangements and the hexamer-hexamer interaction interface. Reconstructions of the apo, ATP, and ADP states identify that Rvb1/2 undergoes substantial conformational changes that include a twist in the insertion-domain position and a corresponding rotation of the AAA+ ring. These results reveal how the ATP hydrolysis cycle of the AAA+ domains directs insertion-domain movements that could provide mechanical force during remodeling or helicase activities.
Rvb1和Rvb2是必需的AAA+蛋白,它们在包括染色质重塑因子INO80和SWR-C在内的多种大分子以及包括端粒酶和小核仁核糖核蛋白颗粒(snoRNPs)在内的核糖核蛋白复合物的组装和活性过程中相互作用。Rvb1/2的ATP水解是其功能所必需的;然而,驱动底物重塑的机制尚不清楚。在这里,我们使用冷冻电子显微镜确定了酵母Rvb1/2十二聚体的结构,并发现底物结合插入结构域会响应核苷酸状态而发生构象变化。二维和三维分类定义了十二聚体的灵活性,揭示了不同的排列方式以及六聚体-六聚体相互作用界面。对空载、ATP和ADP状态的重建表明,Rvb1/2会发生大量构象变化,包括插入结构域位置的扭曲以及AAA+环的相应旋转。这些结果揭示了AAA+结构域的ATP水解循环如何指导插入结构域的运动,而这种运动可能在重塑或解旋酶活性过程中提供机械力。