Mans Janet, Armah George E, Steele A Duncan, Taylor Maureen B
Department of Medical Virology, University of Pretoria, Pretoria, South Africa.
Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana.
PLoS One. 2016 Apr 26;11(4):e0146280. doi: 10.1371/journal.pone.0146280. eCollection 2016.
Norovirus (NoV) is recognised as a leading cause of gastroenteritis worldwide across all age groups. The prevalence and diversity of NoVs in many African countries is still unknown, although early sero-prevalence studies indicated widespread early infection. Reports on NoVs in Africa vary widely in terms of study duration, population groups and size, inclusion of asymptomatic controls, as well as genotyping information. This review provides an estimate of NoV prevalence and distribution of genotypes of NoVs in Africa. Inclusion criteria for the review were study duration of at least 6 months, population size of >50 and diagnosis by RT-PCR. As regions used for genotyping varied, or genotyping was not always performed, this was not considered as an inclusion criteria. A literature search containing the terms norovirus+Africa yielded 74 publications. Of these 19 studies from 14 out of the 54 countries in Africa met the inclusion criteria. Data from studies not meeting the inclusion criteria, based on sample size or short duration, were included as discussion points. The majority of studies published focused on children, under five years of age, hospitalised with acute gastroenteritis. The mean overall prevalence was 13.5% (range 0.8-25.5%) in children with gastroenteritis and 9.7% (range 7-31%) in asymptomatic controls, where tested. NoV GII.4 was the predominant genotype identified in most of the studies that presented genotyping data. Other prevalent genotypes detected included GII.3 and GII.6. In conclusion, NoV is a common pathogen in children with diarrhoea in Africa, with considerable carriage in asymptomatic children. There is however, a paucity of data on NoV infection in adults.
诺如病毒(NoV)被认为是全球所有年龄组中导致肠胃炎的主要原因。尽管早期血清流行率研究表明诺如病毒在许多非洲国家早期感染广泛,但这些国家中诺如病毒的流行情况和多样性仍然未知。关于非洲诺如病毒的报告在研究持续时间、人群组和规模、无症状对照的纳入以及基因分型信息等方面差异很大。本综述对非洲诺如病毒的流行情况和基因型分布进行了估计。该综述的纳入标准为研究持续时间至少6个月、人群规模大于50且通过逆转录聚合酶链反应(RT-PCR)进行诊断。由于用于基因分型的区域各不相同,或者并非总是进行基因分型,因此这不作为纳入标准。一项包含“诺如病毒+非洲”等关键词的文献检索共获得74篇出版物。其中,来自非洲54个国家中14个国家的19项研究符合纳入标准。基于样本量或持续时间较短而不符合纳入标准的研究数据被作为讨论要点纳入。大多数已发表的研究集中在5岁以下因急性肠胃炎住院的儿童。肠胃炎儿童中的总体平均流行率为13.5%(范围为0.8%-25.5%),在进行检测的无症状对照中为9.7%(范围为7%-31%)。在大多数提供基因分型数据的研究中,诺如病毒GII.4是鉴定出的主要基因型。检测到的其他流行基因型包括GII.3和GII.6。总之,诺如病毒是非洲腹泻儿童中的常见病原体,在无症状儿童中也有相当比例的携带。然而,关于成人诺如病毒感染的数据却很少。