Knop Doriv, Levinson Dana, Makovitzki Arik, Agami Avi, Lerer Elad, Mimran Avishai, Yarden Oded, Hadar Yitzhak
Department of Plant Pathology and Microbiology, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel.
Department of Biotechnology, Israel Institute for Biological Research, Ness-Ziona, Israel.
Appl Environ Microbiol. 2016 Jun 30;82(14):4070-4080. doi: 10.1128/AEM.00743-16. Print 2016 Jul 15.
Although Mn(2+) is the most abundant substrate of versatile peroxidases (VPs), repression of Pleurotus ostreatus vp1 expression occurred in Mn(2+)-sufficient medium. This seems to be a biological contradiction. The aim of this study was to explore the mechanism of direct oxidation by VP1 under Mn(2+)-deficient conditions, as it was found to be the predominant enzyme during fungal growth in the presence of synthetic and natural substrates. The native VP1 was purified and characterized using three substrates, Mn(2+), Orange II (OII), and Reactive Black 5 (RB5), each oxidized by a different active site in the enzyme. While the pH optimum for Mn(2+) oxidation is 5, the optimum pH for direct oxidation of both dyes was found to be 3. Indeed, effective in vivo decolorization occurred in media without addition of Mn(2+) only under acidic conditions. We have determined that Mn(2+) inhibits in vitro the direct oxidation of both OII and RB5 while RB5 stabilizes both Mn(2+) and OII oxidation. Furthermore, OII was found to inhibit the oxidation of both Mn(2+) and RB5. In addition, we could demonstrate that VP1 can cleave OII in two different modes. Under Mn(2+)-mediated oxidation conditions, VP1 was able to cleave the azo bond only in asymmetric mode, while under the optimum conditions for direct oxidation (absence of Mn(2+) at pH 3) both symmetric and asymmetric cleavages occurred. We concluded that the oxidation mechanism of aromatic compounds by VP1 is controlled by Mn(2+) and pH levels both in the growth medium and in the reaction mixture.
VP1 is a member of the ligninolytic heme peroxidase gene family of the white rot fungus Pleurotus ostreatus and plays a fundamental role in biodegradation. This enzyme exhibits a versatile nature, as it can oxidize different substrates under altered environmental conditions. VPs are highly interesting enzymes due to the fact that they contain unique active sites that are responsible for direct oxidation of various aromatic compounds, including lignin, in addition to the well-known Mn(2+) binding active site. This study demonstrates the limits of versatility of P. ostreatus VP1, which harbors multiple active sites, exhibiting a broad range of enzymatic activities, but they perform differently under distinct conditions. The versatility of P. ostreatus and its enzymes is an advantageous factor in the fungal ability to adapt to changing environments. This trait expands the possibilities for the potential utilization of P. ostreatus and other white rot fungi.
虽然锰离子(Mn(2+))是多功能过氧化物酶(VPs)最丰富的底物,但在锰离子充足的培养基中,平菇(Pleurotus ostreatus)vp1基因的表达受到抑制。这似乎是一个生物学上的矛盾。本研究的目的是探索在缺锰条件下VP1直接氧化的机制,因为在合成底物和天然底物存在的情况下,它是真菌生长过程中的主要酶。使用三种底物(锰离子、橙黄II(OII)和活性黑5(RB5))对天然VP1进行了纯化和表征,每种底物由酶中的不同活性位点氧化。虽然锰离子氧化的最适pH值为5,但两种染料直接氧化的最适pH值为3。事实上,只有在酸性条件下,在不添加锰离子的培养基中才会发生有效的体内脱色。我们已经确定,锰离子在体外抑制OII和RB5的直接氧化,而RB5稳定锰离子和OII的氧化。此外,发现OII抑制锰离子和RB5的氧化。此外,我们可以证明VP1可以以两种不同模式切割OII。在锰离子介导的氧化条件下,VP1仅能以不对称模式切割偶氮键,而在直接氧化的最适条件下(pH 3时无锰离子),对称和不对称切割均会发生。我们得出结论,VP1对芳香族化合物的氧化机制受生长培养基和反应混合物中的锰离子和pH水平控制。
VP1是白腐真菌平菇木质素降解血红素过氧化物酶基因家族的成员,在生物降解中起重要作用。这种酶具有多功能性,因为它可以在不同的环境条件下氧化不同的底物。由于VPs除了众所周知的结合锰离子的活性位点外,还含有负责直接氧化各种芳香族化合物(包括木质素)的独特活性位点,因此它们是非常有趣的酶。本研究证明了平菇VP1的多功能性的局限性,它具有多个活性位点,表现出广泛的酶活性,但在不同条件下表现不同。平菇及其酶的多功能性是真菌适应不断变化的环境能力的一个有利因素。这一特性扩大了平菇和其他白腐真菌潜在利用的可能性。