• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

类染色质体蛋白TDRD6支持长3'非翻译区触发的无义介导的mRNA降解。

Chromatoid Body Protein TDRD6 Supports Long 3' UTR Triggered Nonsense Mediated mRNA Decay.

作者信息

Fanourgakis Grigorios, Lesche Mathias, Akpinar Müge, Dahl Andreas, Jessberger Rolf

机构信息

Institute of Physiological Chemistry, Medical Faculty Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany.

Deep Sequencing Group SFB 655, Biotechnology Center, Technische Universität Dresden, Dresden, Germany.

出版信息

PLoS Genet. 2016 May 5;12(5):e1005857. doi: 10.1371/journal.pgen.1005857. eCollection 2016 May.

DOI:10.1371/journal.pgen.1005857
PMID:27149095
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4858158/
Abstract

Chromatoid bodies (CBs) are spermiogenesis-specific organelles of largely unknown function. CBs harbor various RNA species, RNA-associated proteins and proteins of the tudor domain family like TDRD6, which is required for a proper CB architecture. Proteome analysis of purified CBs revealed components of the nonsense-mediated mRNA decay (NMD) machinery including UPF1. TDRD6 is essential for UPF1 localization to CBs, for UPF1-UPF2 and UPF1-MVH interactions. Upon removal of TDRD6, the association of several mRNAs with UPF1 and UPF2 is disturbed, and the long 3' UTR-stimulated but not the downstream exon-exon junction triggered pathway of NMD is impaired. Reduced association of the long 3' UTR mRNAs with UPF1 and UPF2 correlates with increased stability and enhanced translational activity. Thus, we identified TDRD6 within CBs as required for mRNA degradation, specifically the extended 3' UTR-triggered NMD pathway, and provide evidence for the requirement of NMD in spermiogenesis. This function depends on TDRD6-promoted assembly of mRNA and decay enzymes in CBs.

摘要

拟染色体(CBs)是精子发生过程中特有的细胞器,其功能大多未知。CBs含有多种RNA种类、RNA相关蛋白以及诸如TDRD6等属于tudor结构域家族的蛋白,而合适的CB结构需要TDRD6。对纯化的CBs进行蛋白质组分析揭示了无义介导的mRNA降解(NMD)机制的组成成分,包括UPF1。TDRD6对于UPF1定位于CBs、UPF-1与UPF2以及UPF1与MVH的相互作用至关重要。去除TDRD6后,几种mRNA与UPF1和UPF2的结合受到干扰,并且NMD的长3'UTR刺激而非下游外显子-外显子连接触发途径受损。长3'UTR mRNA与UPF1和UPF2的结合减少与稳定性增加和翻译活性增强相关。因此,我们确定CBs内的TDRD6是mRNA降解所必需的,特别是延长的3'UTR触发的NMD途径,并为精子发生过程中NMD的需求提供了证据。该功能取决于TDRD6促进的CBs中mRNA和衰变酶的组装。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/32426f0fa277/pgen.1005857.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/9caa30cf8e4c/pgen.1005857.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/9c3badb08f74/pgen.1005857.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/0673c554f2b9/pgen.1005857.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/81fb407ee741/pgen.1005857.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/ab2c76c32a32/pgen.1005857.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/8a0e8e8bc940/pgen.1005857.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/04c5dcf8db33/pgen.1005857.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/32426f0fa277/pgen.1005857.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/9caa30cf8e4c/pgen.1005857.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/9c3badb08f74/pgen.1005857.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/0673c554f2b9/pgen.1005857.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/81fb407ee741/pgen.1005857.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/ab2c76c32a32/pgen.1005857.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/8a0e8e8bc940/pgen.1005857.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/04c5dcf8db33/pgen.1005857.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2abf/4858158/32426f0fa277/pgen.1005857.g008.jpg

相似文献

1
Chromatoid Body Protein TDRD6 Supports Long 3' UTR Triggered Nonsense Mediated mRNA Decay.类染色质体蛋白TDRD6支持长3'非翻译区触发的无义介导的mRNA降解。
PLoS Genet. 2016 May 5;12(5):e1005857. doi: 10.1371/journal.pgen.1005857. eCollection 2016 May.
2
Nonsense in the testis: multiple roles for nonsense-mediated decay revealed in male reproduction.睾丸中的无意义:无意义介导的衰变在男性生殖中的多种作用被揭示。
Biol Reprod. 2017 May 1;96(5):939-947. doi: 10.1093/biolre/iox033.
3
Tdrd6 is required for spermiogenesis, chromatoid body architecture, and regulation of miRNA expression.精子发生、拟染色体体结构及miRNA表达调控均需要Tdrd6。
Curr Biol. 2009 Apr 28;19(8):630-9. doi: 10.1016/j.cub.2009.02.047. Epub 2009 Apr 2.
4
UPF2-Dependent Nonsense-Mediated mRNA Decay Pathway Is Essential for Spermatogenesis by Selectively Eliminating Longer 3'UTR Transcripts.依赖UPF2的无义介导mRNA降解途径通过选择性消除更长的3'UTR转录本对精子发生至关重要。
PLoS Genet. 2016 May 5;12(5):e1005863. doi: 10.1371/journal.pgen.1005863. eCollection 2016 May.
5
Upf1/Upf2 regulation of 3' untranslated region splice variants of AUF1 links nonsense-mediated and A+U-rich element-mediated mRNA decay.AUF1的3'非翻译区剪接变体的Upf1/Upf2调控将无义介导的和富含A+U元件介导的mRNA衰变联系起来。
Mol Cell Biol. 2006 Dec;26(23):8743-54. doi: 10.1128/MCB.02251-05. Epub 2006 Sep 25.
6
Rules that govern UPF1 binding to mRNA 3' UTRs.调控 UPF1 结合 mRNA 3' UTR 的规则。
Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3357-62. doi: 10.1073/pnas.1219908110. Epub 2013 Feb 12.
7
The RNA helicase Ddx5/p68 binds to hUpf3 and enhances NMD of Ddx17/p72 and Smg5 mRNA.RNA 解旋酶 Ddx5/p68 与 hUpf3 结合,增强了 Ddx17/p72 和 Smg5 mRNA 的 NMD。
Nucleic Acids Res. 2013 Sep;41(16):7875-88. doi: 10.1093/nar/gkt538. Epub 2013 Jun 20.
8
Insights into the assembly and architecture of a Staufen-mediated mRNA decay (SMD)-competent mRNP.揭示 Staufen 介导的 mRNA 降解(SMD)复合物形成与结构。
Nat Commun. 2019 Nov 7;10(1):5054. doi: 10.1038/s41467-019-13080-x.
9
Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements.外显子连接复合体成分通过不同的辅因子需求指定无义介导的mRNA降解的不同途径。
Mol Cell. 2005 Oct 7;20(1):65-75. doi: 10.1016/j.molcel.2005.08.012.
10
Execution of nonsense-mediated mRNA decay: what defines a substrate?无义介导的mRNA降解的执行:是什么定义了一个底物?
Curr Opin Cell Biol. 2009 Jun;21(3):394-402. doi: 10.1016/j.ceb.2009.02.007. Epub 2009 Apr 7.

引用本文的文献

1
Germ granule-mediated mRNA storage and translational control.生殖颗粒介导的mRNA储存与翻译控制。
RNA Biol. 2025 Dec;22(1):1-11. doi: 10.1080/15476286.2025.2462276. Epub 2025 Feb 6.
2
Altered zygotic gene expression caused by sperm with variants disrupts early embryonic development.携带变异的精子导致的合子基因表达改变会破坏早期胚胎发育。
MedComm (2020). 2025 Jan 5;6(1):e70038. doi: 10.1002/mco2.70038. eCollection 2025 Jan.
3
The Intricate Functional Networks of Pre-mRNA Alternative Splicing in Mammalian Spermatogenesis.

本文引用的文献

1
3' UTR length and messenger ribonucleoprotein composition determine endocleavage efficiencies at termination codons.3'非翻译区长度和信使核糖核蛋白组成决定终止密码子处的内切核酸酶切割效率。
Cell Rep. 2014 Oct 23;9(2):555-68. doi: 10.1016/j.celrep.2014.09.012. Epub 2014 Oct 9.
2
MicroRNAs and spermatogenesis.微小 RNA 与精子发生。
Fertil Steril. 2014 Jun;101(6):1552-62. doi: 10.1016/j.fertnstert.2014.04.025.
3
spliceR: an R package for classification of alternative splicing and prediction of coding potential from RNA-seq data.
哺乳动物精子发生中前体 mRNA 可变剪接的复杂功能网络。
Int J Mol Sci. 2024 Nov 10;25(22):12074. doi: 10.3390/ijms252212074.
4
Loss-of-function variant in TDRD6 cause male infertility with severe oligo-astheno-teratozoospermia in human and mice.TDRD6 基因功能丧失性变异导致人类和小鼠严重少弱畸精子症的男性不育。
J Cell Mol Med. 2024 Sep;28(18):e18580. doi: 10.1111/jcmm.18580.
5
MIWI N-terminal arginines orchestrate generation of functional pachytene piRNAs and spermiogenesis.MIWI N 端精氨酸协调功能型减数分裂前期 piRNA 的产生和精子发生。
Nucleic Acids Res. 2024 Jun 24;52(11):6558-6570. doi: 10.1093/nar/gkae193.
6
Translation-dependent and -independent mRNA decay occur through mutually exclusive pathways defined by ribosome density during T cell activation.在T细胞活化过程中,依赖翻译和不依赖翻译的mRNA衰变通过由核糖体密度定义的相互排斥的途径发生。
Genome Res. 2024 Apr 25;34(3):394-409. doi: 10.1101/gr.277863.123.
7
MIWI arginines orchestrate generation of functional pachytene piRNAs and spermiogenesis.MIWI精氨酸调控功能性粗线期piRNA的产生及精子发生。
bioRxiv. 2024 Jan 1:2023.12.31.573779. doi: 10.1101/2023.12.31.573779.
8
Stress decreases spermatozoa quality and induces molecular alterations in zebrafish progeny.压力会降低精子质量,并导致斑马鱼后代发生分子改变。
BMC Biol. 2023 Apr 3;21(1):70. doi: 10.1186/s12915-023-01570-w.
9
The m6A reader PRRC2A is essential for meiosis I completion during spermatogenesis.m6A 阅读器 PRRC2A 在精子发生过程中对于减数分裂 I 的完成是必不可少的。
Nat Commun. 2023 Mar 24;14(1):1636. doi: 10.1038/s41467-023-37252-y.
10
SMG6 localizes to the chromatoid body and shapes the male germ cell transcriptome to drive spermatogenesis.SMG6 定位于染色质小体并塑造雄性生殖细胞转录组以驱动精子发生。
Nucleic Acids Res. 2022 Nov 11;50(20):11470-11491. doi: 10.1093/nar/gkac900.
spliceR:一个用于 RNA-seq 数据中可变剪接分类和编码潜力预测的 R 包。
BMC Bioinformatics. 2014 Mar 23;15:81. doi: 10.1186/1471-2105-15-81.
4
An atlas of chromatoid body components.染色质体成分图谱
RNA. 2014 Apr;20(4):483-95. doi: 10.1261/rna.043729.113. Epub 2014 Feb 19.
5
Posttranscriptional control of the stem cell and neurogenic programs by the nonsense-mediated RNA decay pathway.通过无意义介导的 RNA 降解途径对干细胞和神经发生程序的转录后控制。
Cell Rep. 2014 Feb 27;6(4):748-64. doi: 10.1016/j.celrep.2014.01.028. Epub 2014 Feb 13.
6
Ensembl 2014.Ensembl 2014.
Nucleic Acids Res. 2014 Jan;42(Database issue):D749-55. doi: 10.1093/nar/gkt1196. Epub 2013 Dec 6.
7
Chromatin dynamics during spermiogenesis.精子发生过程中的染色质动力学。
Biochim Biophys Acta. 2014 Mar;1839(3):155-68. doi: 10.1016/j.bbagrm.2013.08.004. Epub 2013 Sep 30.
8
The splicing landscape is globally reprogrammed during male meiosis.在雄性减数分裂过程中,剪接景观在全球范围内被重新编程。
Nucleic Acids Res. 2013 Dec;41(22):10170-84. doi: 10.1093/nar/gkt811. Epub 2013 Sep 12.
9
The 5'-untranslated region regulates ATF5 mRNA stability via nonsense-mediated mRNA decay in response to environmental stress.5'-非翻译区通过无意义介导的 mRNA 降解调控 ATF5 mRNA 的稳定性,以响应环境应激。
FEBS J. 2013 Sep;280(18):4693-707. doi: 10.1111/febs.12440. Epub 2013 Aug 19.
10
Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3' UTRs.依赖于翻译的 UPFl 从编码序列中的位移导致其在 3'UTR 中的富集。
Nat Struct Mol Biol. 2013 Aug;20(8):936-43. doi: 10.1038/nsmb.2635. Epub 2013 Jul 7.