Mo Ji-Su, Kim Kyunghee, Lee Myoung Hee, Lee Jeong-Hee, Yoon Ung-Han, Kim Tae-Ho
a Department of Agricultural Biotechnology , Genomics Division, Crop Genomics Laboratory, National Academy of Agricultural Science, RDA , Republic of Korea.
b Department of Plant Science , Plant Genomics and Breeding Institute, and Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University , Seoul , Republic of Korea.
Mitochondrial DNA A DNA Mapp Seq Anal. 2017 Jan;28(1):131-132. doi: 10.3109/19401736.2015.1111356. Epub 2016 Mar 3.
Perilla citriodora is a diploid and an aromatic herb species belonging to the family Lamiaceae and widely distributed in East Asia. The complete chloroplast genome sequence of P. citriodora was generated by de novo assembly using whole genome next-generation sequences. The assembled chloroplast genome of P. citriodora was 152 588 bp in length and structurally divided into four distinct regions; large single copy region (83 699 bp), small single copy region (17 537 bp), and a pair of inverted repeat regions (25 676 bp). A total of 115 genes were annotated including 81 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic relationship with previously reported chloroplast genomes revealed that P. citriodora is most closely related to P. frutescens, a tetraploid Perilla species.
柠檬紫苏是一种二倍体芳香草本植物，属于唇形科，广泛分布于东亚地区。利用全基因组二代测序数据进行从头组装，获得了柠檬紫苏的完整叶绿体基因组序列。组装得到的柠檬紫苏叶绿体基因组长度为152588 bp，结构上分为四个不同区域：大单拷贝区（83699 bp）、小单拷贝区（17537 bp）和一对反向重复区（25676 bp）。共注释了115个基因，包括81个蛋白质编码基因、30个tRNA基因和4个rRNA基因。与先前报道的叶绿体基因组的系统发育关系表明，柠檬紫苏与四倍体紫苏物种皱紫苏关系最为密切。
