越南人参（五加科）的叶绿体全基因组序列
The complete chloroplast genome sequence of Panax vietnamensis Ha et Grushv (Araliaceae).
作者信息
Nguyen Binh, Kim Kyunghee, Kim Young-Chang, Lee Sang-Choon, Shin Ji Eon, Lee Junki, Kim Nam-Hoon, Jang Woojong, Choi Hong-Il, Yang Tae-Jin
机构信息
a Department of Plant Science , Plant Genomics and Breeding Institute, and Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University , Seoul , Republic of Korea.
b Phyzen Genomics Institute , Gwanak-Gu , Seoul , Republic of Korea.
出版信息
Mitochondrial DNA A DNA Mapp Seq Anal. 2017 Jan;28(1):85-86. doi: 10.3109/19401736.2015.1110810. Epub 2015 Dec 28.
The complete chloroplast genome sequence of Panax vietnamensis, a medicinal herb belonging to Araliaceae family, was generated by de novo assembly using whole genome next-generation sequences. The chloroplast genome was a circular form of 155 992 bp long and showed typical chloroplast genome structure consisting of a large single-copy region of 86 177 bp, a small single copy region of 17 935 bp and a pair of inverted repeats of 25 940 bp. The chloroplast genome had 79 protein-coding genes, 29 tRNA genes and 4 rRNA genes. The phylogenetic analysis with the reported chloroplast genomes revealed that four Panax species were grouped in the same clade and P. vietnamensis is more closely related to P. notoginseng than P. ginseng and P. quinquefolius.
越南人参是五加科的一种药用植物，其完整的叶绿体基因组序列是通过使用全基因组下一代序列进行从头组装生成的。叶绿体基因组呈环状，长度为155992 bp，具有典型的叶绿体基因组结构，包括一个86177 bp的大单拷贝区域、一个17935 bp的小单拷贝区域和一对25940 bp的反向重复序列。叶绿体基因组有79个蛋白质编码基因、29个tRNA基因和4个rRNA基因。与已报道的叶绿体基因组进行的系统发育分析表明，四种人参属物种聚在同一个分支中，越南人参与三七的亲缘关系比与人参和西洋参更近。
Zotero 插件